GCG fastA interpretation--how??

Kevin P. O'Connell oconne18 at pilot.msu.edu
Mon Feb 6 15:20:00 EST 1995


Hi all,
 
Could some kind soul direct me to a lucid and useful explanation of how
to best interpret and use GCG fastA search results?  Specifically, what is
the histogram good for, and what exactly do these "init" scores tell me
about the "goodness" of the fit of my query sequence to the database?  
Is there a "GCG for Dumdums" book one can use?  I've read the descriptions
in the manual, and I am still unenlightened.
 
Thanks!
 
 
K



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