sorry cant help. Im looking too :(

[Brian Foley]

Alan Nighorn wrote:

> Basically we are looking for something with lots of flexibility 
> in its output. Any suggestions?

	If you can't find it on the Multiple Sequence Alignment
pages at:

http://www.techfak.uni-bielefeld.de/bcd/Curric/MulAli/welcome.html

it probably does not exist.

After you have BOXSHADED it or whatever, if you want to add
arrows and other stuff, import it into a graphics/drawing 
program, and go to it.

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|Brian T. Foley               btf at t10.lanl.gov                       |
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