antigenic algorythms software/Fusion prot.s

darren cikaluk dcikaluk at
Thu Feb 6 10:13:11 EST 1997

I am going to be making a fusion protein from  part the cDNA I have just
cloned.  I need to pick a region of my 800 aa protein-encoded cDNA but
I'm not to sure where to choose.  I  know it should be the least
hydrophobic etc. but does anyone know of a program that finds the most
antigenic region of your protein?  I know there is one out there but I
forget the name.

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