DNA sequence comparision

Ashok Aiyar aiyar at ebv.oncology.wisc.edu
Thu Feb 20 09:42:26 EST 1997


On Wed, 19 Feb 1997 17:32:47 -0500, wjc at acsu.buffalo.edu <wjc at acsu.buffalo.edu> wrote:

>Recently, I got two DNA sequences and I want to compare the homology
>between them.  Does anybody know any simple program can run it?  Or any
>shareware I can use for the comparision?

If you only have two sequences, you can use Bill Pearson's FASTA
package.  You can find Mac and PC binaries, along with C source
code at ftp://ftp.virginia.edu/pub/fasta

Later,
Ashok
-- 
Ashok Aiyar, Ph.D.
McArdle Laboratory for Cancer Research
aiyar at ebv.oncology.wisc.edu



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