Detection of Prokaryotic terminators
Justin Powell
jacp1 at mole.bio.cam.ac.uk
Tue Feb 17 10:40:30 EST 1998
How does one detect prokaryotic terminators in sequence data? I can run
GCG stemloop to find stemloop structures but presumably having found them
I should run RNA folding software to find the energies of the structures.
How much of the sequence should I put into the folding software, just the
region around the stemloop structures or more of the transcript? I have
not been able to find any WWW servers which search specifically for
terminators.
Justin Powell
Dept. Genetics
Cambridge
UK
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