Epitope Mapping Software [Q]

Michael Oda MNODA at lipovx.lbl.gov
Tue Jan 27 17:49:37 EST 1998


Hi,

     My lab is thinking of raising antibodies against a synthetic peptide
derived from a known protein sequence. To get the best immune response I
was wondering if anyone knew of any software (preferably Mac) that would
allow me to analyze linear epitopes on a protein sequence for regions of
greatest antigenicity. I vaguely recall that there was a free/shareware
program that allowed you to do this. I've heard of the Fujitsu Epimap(?)
program but regretably our budget won't cover anything that elaborate.

                              Thanks in advance,
                              Mike Oda

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Michael Oda, PhD.                      |   Phone: (510) 486-4088
Donner Labs                            |    Fax: (510) 486-4750
Lawrence Berkeley National Laboratory  |  Pager: (510) 702-4427 
Berkeley, CA  94720                    |  email: mnoda at lipovx.lbl.gov
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