mRNA secondary structure plots
U. Gausmann
ugau at mti-n.uni-jena.de
Wed Jun 24 02:35:37 EST 1998
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> Hi all,
> I'd like to draw some mRNA secondary struture plots because I want
> to find out where in the structure some antisense oligos might bind.
> know about a tool in the GCG package that I can output to a HPGL
> file.
>
> Is anyone aware of a tool to produce a RASMOL file or another
> optically more impressing output?
>
> Thanks for all input,
> Wolfgang
>
Hi Wolfgang,
I do not know if the output is more impressing but
maybe the mfold server is helpful.
http://www.ibc.wustl.edu/~zuker/rna/
Ulrike
--
Ulrike Gausmann | D-07743 Jena
Institut fuer Anatomie | Germany
Anatomie II | Tel. +49 (0)3641 938553
Teichgraben 7 | email ugau at mti-n.uni-jena.de
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<TT>> Hi all,</TT>
<BR><TT>> I'd like to draw some mRNA secondary struture plots because I
want</TT>
<BR><TT>> to find out where in the structure some antisense oligos might
bind.</TT>
<BR><TT>> know about a tool in the GCG package that I can output to a HPGL</TT>
<BR><TT>> file.</TT>
<BR><TT>></TT>
<BR><TT>> Is anyone aware of a tool to produce a RASMOL file or another</TT>
<BR><TT>> optically more impressing output?</TT>
<BR><TT>></TT>
<BR><TT>> Thanks for all input,</TT>
<BR><TT>> Wolfgang</TT>
<BR><TT>></TT>
<BR><TT></TT> <TT></TT>
<P><TT>Hi Wolfgang,</TT><TT></TT>
<P><TT>I do not know if the output is more impressing but</TT>
<BR><TT>maybe the mfold server is helpful.</TT><TT></TT>
<P><TT><A HREF="http://www.ibc.wustl.edu/~zuker/rna/">http://www.ibc.wustl.edu/~zuker/rna/</A></TT><TT></TT>
<P><TT>Ulrike</TT>
<BR><TT></TT> <TT></TT>
<P><TT>--</TT>
<BR><TT>Ulrike Gausmann
| D-07743 Jena</TT>
<BR><TT>Institut fuer Anatomie | Germany</TT>
<BR><TT>Anatomie II
| Tel. +49 (0)3641 938553</TT>
<BR><TT>Teichgraben 7
| email ugau at mti-n.uni-jena.de</TT>
<BR><TT></TT> </HTML>
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