IUBio

exon/intron prediction

Bernard P. Murray, PhD bpmurray*STUFFER* at socrates.ucsf.edu
Wed Mar 3 17:38:33 EST 1999


In article <36DD4D68.48CD29C2 at dkfz-heidelberg.de>, Clemens
Suter-Crazzolara <c.suter-crazzolara at dkfz-heidelberg.de> wrote:

> Hello,
> I am preparing a course, and therfore I am looking for programmes that
> allow intron/exon prediction. Until now I have found: genscan, frames,
> xpound, codonpreference, testcode, fgenes, orffinder and genlang.
> Are there other programmes for this purpose out there ?
> Thanks in advance, if possible mail to my e-mail address.
> Clemens Suter-Crazzolara
> Bioinformatics, DKFZ Heidelberg

There are a few others accessible through the Baylor
launch page;
      http://dot.imgen.bcm.tmc.edu:9331/seq-search/gene-search.html

I've played with RNASPL and found the results informative.
     Bernard

[posted and mailed]
-- 
Bernard P. Murray, PhD
Dept. Cell. Mol. Pharmacol., UCSF, San Francisco, USA



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