Sequence Alignment Program

[sfrye at operamail.com]

Hi,

Anybody out there who knows a program, preferable WinDOS, that does a
graphical display of aligned sequences, similar to MACAW, and
indicates similarities by drawing lines between the bares.
I would like to show a sequence doubling etc. with this feature.
Any hints and suggestions are appreciated.

P.S.: Here a link to a fast search program:
ParAlign and Smith-Waterman - Rapid and sensitive sequence database
searches http://dna.uio.no/search/
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mailto:sfrye at operamail.com