protein sequence to restriction sites tool?

Dr. Hiranya S. Roychowdhury hroychow at nmsu.edu
Thu Feb 17 10:51:44 EST 2005


This one seems to be a fantastic offering!  I will definitely download it at 
home and into my laptop.  I work on a Mac in my office (Ja ... Ja ... I know 
...)

Quoting Christiaan Karreman <karreman at onkochemie.uni-duesseldorf.de>:

> Try AiO
> 
> http://134.99.88.55/aio/
> 
> the backtranslate function will do that. Protein with all possible
> restriction
> sites.
> 
> It can also take DNA sequences, translate an ORF and backtranslate that. It
> will show the restriction site present in the original DNA and those you
> can
> create without changing the protein sequence.
> 
> Christiaan
> 
> 
> Wofo schrieb:
> 
> > Dear all,
> >
> > I am looking for this online tool where you may enter a protein sequence
> > and it outputs you a set of dna sequences coding for the peptide but
> having
> > all possible restriction sites.
> >
> > Any ideas?
> >
> > Your input is welcome!
> >
> > Wolfgang
> > please reply to the group, the email address ends in auto trash
> > *^_^*
> >
> > ---
> 
> 


-- 
Hiranya S. Roychowdhury, Ph.D.
Coll. Asst. Professor,
Molecular Biology,
Dept. of Chemistry & Biochemistry
Rm# 336, Chemistry Bldg.; MSC 3MLS
New Mexico State University
Las Cruces, NM 88003
---



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