codon usage tool

R. Jayakumar jakku at mrna.tn.nic.in
Thu Oct 19 06:10:45 EST 2000


hi..
   try out this website.. but it requires your organism name.
http://www.kazusa.or.jp/codon/

best of luck
jayakumar
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R. JAYAKUMAR
CSIR- Senior Research Fellow
Dept. of Molecular Microbiology,
School of Biotechnology,
Madurai Kamaraj University,
Madurai - 625 021.
India
email: jakku at linuxfan.com
tel: +91-452-858471-374
efax: (603)-688-4665
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"YOu harvest what you sow.. so sow happiness everywhere"
----- Original Message -----
From: Don Walthers <donwalthers at hotmail.com>
To: <microbio at hgmp.mrc.ac.uk>
Sent: Wednesday, October 18, 2000 2:20 AM
Subject: codon usage tool


> Hello,
> Does anyone know of a tool (software or web-based) that can determine
codon
> usage frequency on an entire genome (~50kb) from a genebank file
(generated
> by VectorNTI)?
> Thanks for any help,
>
> --
> Don Walthers  donwalthers at hotmail.com
> BS Microbiology U of Illinois at UC, 1996
> PhD Microbiology U of Idaho, soon
> Our gene pool needs a little chlorine.
>
>
>
>


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