Alignment of Coding Sequences

[Jason E Stewart]

Does anyone know of a program that will limit the addition of gaps in an
alignment to mulitples of three when the sequences being compared are known
to be coding sequences?

TIA

Jason.

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Jason Stewart                                 Father at large
Department of Medical Genetics            jasons at bmc.uu.se
Biomedical Center, Box 589                Tel 46 18 17 49 10
751 23 Uppsala                            Fax 46 18 52 48 69
Sweden