Sliding window GC%

Peter Rice pmr at sanger.ac.uk
Wed Aug 14 03:56:33 EST 1996


In article <199608132247.PAA11103 at parker.bio.uci.edu> ayalalab at PARKER.BIO.UCI.EDU (ayalalab) writes:
>   Is there anybody knowing about any program to analyse the GC content by sliding a 
>   window along the sequence?.
>   Thank you.

If you have access to the GCG (Wisconsin) Sequence Analysis Package, you can
do this with the STATPLOT and WINDOW programs. Just look for "S" (G or C).


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Peter Rice                           | Informatics Division,
E-mail: pmr at sanger.ac.uk             | The Sanger Centre,
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