Max Like for Amino Acid seqs

Byron Adams bjadams at CRCVMS.UNL.EDU
Wed Sep 18 14:20:40 EST 1996


Folks-
        I'm interested in finding a Maximum Liklihood program for
reconstructing phylogeny using amino acid sequences- any suggestions?


Byron

______________________________________________________________________________
Byron J. Adams
University of Nebraska
406 Plant Sciences Hall
P.O. Box 830722
Lincoln, NE 68583-0722
(402) 472-2858                      "Wilderness, once we have given
fax (402) 472-2853                   it up, is beyond our
bjadams at crcvms.unl.edu               reconstruction."
                                         -Wallace Stegner
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
"Evolution is a change from a nohowish, untalkaboutable all-alikeness, to a
somehowish and ingeneral-talkaboutable, not-all-alikeness, by continuous
somethingelsifications and stick-togetherations."
        -a mathmatician named Kirkman

(from Tait, P. G.  1880. "Prof. Tait on the Formula of Evolution."  Nature,
(23)pp.80-82.  [from Dennet, D. C.  1995, p393.  Darwin's Dangerous Idea:
Evolution and Meanings of Life.  Simon & Schuster, New York, NY.
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