problem

Gustavo Parisi gustavo at unq.edu.ar
Tue Apr 28 16:14:53 EST 1998


I have the following problem:
I've obtained 5 most parsimonious trees using different a posteriori
weighting schemes. The tree with the best fitness for the data ,as
indicated from the evaluation of different homoplasy index, was number 4
(obtained using RC with the reweighting option in PAUP). I've run a
Kishino test using protml, over the 5 trees and the best one with 0.6 
bootstrap probability is number  3. How can I decide which of the two
topologies is the best estimate for my data?
Thank you in advance,

gustavo


-- 
Gustavo Parisi
Unidad de Fisicoquimica
Universidad Nacional de Quilmes
Avenida Calchaqui Km. 23.500
1888 Florencio Varela, Buenos Aires
Argentina

E-mail:gustavo at unq.edu.ar
Fax: ++ 54-1-275 7716
Tel: ++54-1-275-7176




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