Codon rate ML models

Thomas Buckley Thomas.Buckley at vuw.ac.nz
Wed Dec 9 18:46:00 EST 1998


Can someone please give me references to any papers that discuss and or
use maximum likelihood models that assign relative rates to different
codon positions as a method of modelling among-site rate variation.
This method is discussed briefly in the Swofford et al. (1996) molecular
systematics chapter, and implemented in PAUP*4.0, but I can't track down
any other references.

Thanks,

Thomas Buckley







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