protein-protein docking program?

Mary Coventry coventry at chem.washington.edu
Fri Apr 21 23:23:51 EST 1995


In article <3n8mdl$8j1 at nntp.ucs.ubc.ca>, ywchen at laue.biochem.ubc.ca (Y. W.
Chen) wrote:

> Dear all,
> 
> I am studying the interaction of a protein enzyme with a protein substrate.
> From mutation studies, I know roughly which region of the enzyme interacts
> with which region of the substrate.  Can someone recommend a program to 
> predict the docking of these 2 proteins?  It would be best if the results 
> can be visualized graphically.  Thanks
> 
Well, it depends on does anybody solved (by X-ray or NMR) the 3-D
structures of the wild-type or mutated enzymes of interest or not. If yes,
there're some prospects but if not, you should satisfied yourself with
primitive cartoons. :-<
Cheers,  Oleg Y. Fedoroff.



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