how do you go from DNA sequence to molec-model?

lhairston at lhairston at
Tue Mar 14 14:34:27 EST 1995

In article <3ikau1$90s at> philstas at (Stas Philippe) writes:
>Subject: Re: how do you go from DNA sequence to molec-model?
>From: philstas at (Stas Philippe)
>Date: 24 Feb 1995 10:03:45 GMT

>George Poulos (gwpoulos at wrote:
>: Hello,
>:       I was wondering if anyone out there could give me a list of useful
>: programs (either for a UNIX or PC system) which could convert from a
>: nucleotide sequence to a set of atomic coordinates (ie. PDB file format) which
>: can be displayed with a molecular modelling program? I would like to be able
>: to take a nucleotide sequence and impose a known secondary structure to get a
>: final molecular structure.  Please send me any FTP locations for these
>: programs. 
>:                                       Thank You.
>:                                       gwpoulos at acs.bu.eduA

>Are you looking for a program that displays the secondary structure of 
>your DNA? Or do you really want to predict the secondury structure of
>the protein coded by the DNA sequence?

>Philippe Stas

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