how to judge the quality of a alignment when doing model building?

Chyh-chong Chuang ccchuang at GATE.SINICA.EDU.TW
Wed Jan 10 11:40:32 EST 1996


Dear netters:

	I am curious how to judge the quality of a alignment when doing 
model building? The alignment pattern direct the way to assign structure 
conserved region, but how to judge the quality? 
	Any comment will be appreciated.

Thanks all.

ccchuang

  ============================================
    Chyh-Chong Chuang
    Institude of Biological Chemistry, 
    Academia Sinica,Taipei, Taiwan
  --------------------------------------------
    Phone: 886-2-7858981 ext 7091 
    Fax: 886-2-7883473
    E-Mail: ccchuang at gate.sinica.edu.tw
  ============================================




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