(none)

arnold at BSCR.UGA.EDU arnold at BSCR.UGA.EDU
Tue Jun 18 12:47:25 EST 1996


                                                                  Aspergillus nidulans Chromosome V - Version 2 - Aligned with Genetic Map - 100 Probe Pools
                                                                                                      MINIMAL MAP
                                                                                                   Estimated Coverage = 81%
                                                                                                   Estimated Physical Size = 3090 kb

KB            LOCUS      CLONE/CHR        CLONE                 10        20        30        40        50        60        70        80        90        100
                         HYBR.            NAME         .|........|.........|.........|.........|.........|.........|.........|.........|.........|.........|
                        12345678                       -----------------------------------------------------------------------------------------------------
|-0                         M           * SWO5HO9      1|...................................................................................................
                                                       -----------------------------------------------------------------------------------------------------
|-0                     M L L             RWO5BO5      .|1..................................................................................................
|                        LH H             RW15HO4      .|11....................................1......................1.....................................
|-50                        M           * SW26E1O      .|.1.1...............................................................................................
|                           MM            RWO5GO9      .|.11................................................................................................
|-100                       L           * SW1OHO9      .|..1................................................................................................
|                       L   H             RWO3GO9      .|..11...............................................................................................
|                           H           * SLO8HO5      .|...1...............................................................................................
|-150                       M           * SW24EO8      .|...11..............................................................................................
|                        ML M ML          RWO7A11      .|....11.............................................................................................
|                           M           * SW22CO2      .|...1.1.1...........................................................................................
|-200                       H           * SL11CO5      .|.....111...........................................................................................
|                           H             SL19DO2      .|......11...........................................................................................
|-250                       H           * SL25C11      .|.......1...........................................................................................
|                           M             SW12D11      .|.......11..........................................................................................
|             (nudC)        L           * SWO2EO7      .|........11..................................................1......................................
|-300                       H           * SL14GO6      .|.........1.........................................................................................
|                           M HL          RW22CO3      .|......1..11....................................1...................................................
|                         MHMHML          RL2OGO3      .|..........1........................................................................................
|                       M   M             RL1OE11      .|.........111....................................................................................1..
|                           H           * SLO4HO5      .|...........1.......................................................................................
|                           H           * SLO4FO1      .|...........111.....................................................................................
|-350                       H           * SL31H11      .|............11.....................................................................................
|                         H H L           RL14AO4      .|......1......11.........1...................1.........1............................................
|                       LMM LH            RL2OHO6      .|.......1......1....................................................................................
|                           M  H          RL18HO3      .|..............11...........................................1.....1.................................
|-400                       H           * SL15FO2      .|...............1...................................................................................
|                         M LH            RL12DO2      .|...............11..................................................................................
|                         L LH            RW12AO8      .|................1..................................................................................
|                       M MMHHMM          RL22GO6      .|................11.................................................1...............................
|-450                       M           * SW29CO7      .|............1....1.................................................................................
|                           LH            RL11BO4      .|.................11........1.......................................................................
|                           H           * SL28EO1      .|..................1................................................................................
|-500                       H           * SLO5CO6      .|..................111..............................................................................
|                       MMMHMM            RWO3BO8      .|...................11......................................1......................1................
|                           L           * SL31AO1      .|....................1..............................................................................
|-550                       H           * SL25HO9      .|....................11.............................................................................
|                           H             SW12FO2      .|..................1111.............................................................................
|                           M             SW13E1O      .|......1.............111.....1.1..1................11...........................................1...
|                       HMHMHLHH          OW1OB1O      .|.....................11.....1.....................................1.............................1..
|                           H           * SL2OGO1      .|......................11...........................................................................
|                           H           * SLO6DO1      .|.......................1...........................................................................
|-600                       H           * SL15AO9      .|.......................11............................................1.............................
|                           M             SW3OEO7      .|........................11......................1..................................................
|-650                       H           * SL24AO3      .|.........................1.........................................................................
|                        L  H             RW21BO6      .|.111.....................11........................................................................
|-700                       H           * SLO7BO2      .|..........................1........................................................................
|                       MLLMH  L          RWO3AO7      .|.........................1111......................................................................
|-750                       H           * SL23C11      .|...........................1.......................................................................
|                           M             SW3OGO2      .|.........................1.111.....................................................................
|                       L MHM             RWO8DO9      .|............................1......................................................................
|                           M             SW22HO9      .|.........................1..11.....................................................................
|-800                       M           * SWO7DO1      .|.............................1.....................................................................
|                           H             SLO3F1O      .|.............................11....................................................................
|-850                       H           * SW12GO8      .|..............................1....................................................................
|                        MMHMH            RL31DO9      .|.......1......................11...................................................................
|-900                       L           * SWO3C1O      .|...............................1...................................................................
|                       M   L             RL21DO7      .|...............................11..................................................................
|-950                       M           * SW3OHO4      .|................................1..................................................................
|                           M             SW11DO4      .|................................11.................................................................
|-1000                      M           * SLO7HO9      .|.................................1..............1..................................................
|                         M HH            RL28E12      .|.................................11................................................................
|                           M L           RLO8A11      .|..................................1................................................................
|                           M H           RW31CO2      .|..................................11...............................................................
|-1050                      H           * SL31G1O      .|...................................1...............................................................
|                           M             SW23F11      .|...................................11..............................................................
|-1100                      M           * SLO7CO8      .|....................................1..............................................................
|                        M MM             RWO2BO3      .|...........1..........1.............11.....1.......................................................
|                         LMLL            RL26HO9      .|...............1.....................11.............................1.....1........................
|                           H           * SL3OAO7      .|......................................1............................................................
|-1150                      M           * SW24H1O      .|......................................11...........................................................
|                           H             SL25CO7      .|.......................................11..........................................................
|-1200                      H           * SL24FO8      .|........................................1..........................................................
|                           M             SWO1EO4      .|....1.......1...........................111.1.....1...............................1................
|-1250                      H           * SLO8GO9      .|.........................................1.........................................................
|                           H             SW19EO8      .|.........................................11............11.................1..........1.............
|-1300                      M           * SW13G1O      .|..........................................1........................................................
|                           H             SL3OG12      .|..........................................11.......................................................
|             (cysC)        H           * SL29GO6      .|...........................................11......................................................
|-1350                      H           * SL13CO4      .|...........................................11......................................................
|                           MH            RL14CO2      .|............................................11.....................................................
|                           H           * SL12CO9      .|.............................................11....................................................
|-1400                      M           * SL22GO7      .|..............................................1....................................................
|                        HLLMLM           RL29E1O      .|..............................................11...................1...............................
|                           M           * SLO5F1O      .|...............................................1...................................................
|-1450                      H           * SL28GO2      .|...............................................11..................................................
|                           M             SL3OHO2      .|................................................11.................................................
|-1500    (phytochrome)     H           * SL28GO5      .|.................................................1.................................................
|                           HM            RL29B12      .|............1....................................11...............................................1
|                         L L LL          RLO6HO2      .|..................................................1................................................
|                         LMM  H          RW17AO7      .|..................................................111.............1................................
|                         M H             RLO5E1O      .|...................................................1...............................................
|             hxA           M             SW14BO5      .|..................................................111..............................................
|-1550        hxA           M           * SW17AO6      .|..................................................1.1..............................................
|                           M             SW27C12      .|..............................1.....................11...................1.........................
|-1600                      M           * SW1OGO9      .|.....................................................1.............................................
|                           H             SL23HO5      .|.....................................................11............................................
|-1650                      H           * SW15D12      .|......................................................1.............1..............................
|                           MH            RL12EO6      .|......................................................11.................1.........................
|                           L           * SW31GO9      .|.......................................................111.........................................
|-1700        sepB          H           * SL3OD12      .|........................................................1..........................................
|                           H             SL13CO7      .|........................................................111........................................
|-1750                      H           * SLO7GO4      .|.........................................................1.........................................
|                         M H             RLO4FO3      .|.........................................................11............1...........................
|-1800                      M           * SW25AO8      .|..........................................................1........................................
|                           H             SLO9HO9      .|.........................................1................11...........1........................1..
|-1850                      M           * SW31CO5      .|...........................................................1.......................................
|                           H             SW15G1O      .|...........................................................11......................................
|-1900                      H           * SWO3H1O      .|............................................................1......................................
|                           MH            RL23E12      .|............................................................11.....................................
|                           M           * SW22EO2      .|.............................................................11....................................
|-1950                      H           * SWO7EO7      .|.............................................................11....................................
|                        MLMHHLH          RL19AO6      .|..............................................................11.11................................
|                           M           * SL21EO3      .|...............................................................1...................................
|-2000                      L           * SW3OCO1      .|...............................................................11.1................................
|                       L M M  H          RL23AO1      .|................................................................11.................................
|-2050                      H           * SL24CO3      .|.........................1.......................................1.................1...............
|                       MLMMHMMM          OL18A11      .|........................................1........................11................................
|-2100        CEN           M           * SL1OGO6      .|..................................................................1................................
|             cen       HMMHHHMH          OL28EO9      .|..................................................................11...............................
|-2150                      M           * SW17BO1      .|...................................................................1...............................
|                        MHHHMHL          RL24E1O      .|...................................................................11..............................
|-2200                      M           * SW18B1O      .|....................................................................1..............................
|                           MH            RL18GO5      .|.............................................1......................11.........1...................
|-2250                      H           * SL24AO7      .|.....................................................................1.............................
|                          LH  L          RW19HO9      .|....1................................................................11...............1............
|-2300                      M           * SW23GO4      .|......................................................................1............................
|                           H             SL14EO4      .|......................................................................11...........................
|-2350                      M           * SWO8D12      .|.......................................................................1...........................
|                           HM H          RL29EO8      .|........................................1.....................1111.....11..........................
|                           MH            RL3OFO7      .|..............................1.........................................1..........................
|                         L M             RW14FO3      .|.1..11.1..........111..1..11........1..........111.111111.1......11.1...1111.....1...1.......1.....
|-2400                      H           * SW19EO7      .|.........................................................................1.........................
|                        LMMH             RW18CO2      .|....1...11..................................................11..1..1.....11.11..............11.....
|                           H           * SL16DO1      .|..........................................................................11.......................
|-2450                      M           * SW31DO7      .|...........................................................................1.......................
|                           M             SL26DO8      .|...........................................................................11......................
|-2500                      M           * SWO5DO1      .|..........................................................................111......................
|             cen       HMHHHMMH          OW14AO2      .|...1.1...1...............1...........1.....1.....1................11........11.....................
|-2550                      M           * SW14HO4      .|.............................................................................1.....................
|                        ML MH            RL3OAO6      .|.......................................1..............1......................11....................
|                           H           * SL22EO2      .|..............................................................................1....................
|-2600                      H           * SWO4HO8      .|..............................................................................11...................
|                       L M LM            RW16DO9      .|...............................................1...............................11.................1
|                           H           * SL28BO5      .|................................................................................11.................
|-2650                      M           * SL3ODO1      .|.................................................................................1.................
|                           L             SW12C1O      .|.................................................................................111...............
|                           H           * SLO5GO6      .|..........................................................1.......................11...............
|                           H           * SL3OAO2      .|...................................................................................1...............
|-2700                      H           * SWO7DO7      .|...................................................................................11..............
|                           H             SL27B11      .|....................................................................................11.............
|                           H           * SL31D12      .|.................................................11..................................1.............
|                           M           * SL26D11      .|.....................................................................................11............
|-2750        facA          H           * SL22DO2      .|......................................................................................11...........
|                         L LM            RL16BO1      .|.......................................................................................11..........
|-2800                      L           * SL11H11      .|........................................................................................1..........
|                           LHH           RL19F1O      .|........................................................................................11...1.....
|                           M           * SWO3E1O      .|.........................................................................................1.........
|-2850                      H           * SW16FO6      .|.........................................................................................11........
|                       H M M             RL22FO7      .|..........................................................................................11.......
|                           M           * SL22HO8      .|...........................................................................................11......
|-2900        (pelA)        H           * SL1OF12      .|............................................................................................1......
|                       M L MM            RL13DO2      .|...................1........................................................................11.....
|                         M H M           RLO3G11      .|.............................................................................................1.....
|                           H             SL15AO3      .|.............................................................................................11....
|                           L           * SL22G11      .|..............................................................................................1....
|-2950                      H           * SLO3E11      .|..............................................................................................11...
|                           H             SL16D11      .|.............................11................................................................11..
|                           H           * SL17GO2      .|................................................................................................11.
|-3000                      H           * SW12EO7      .|.................................................................................................1.
|                           H             SL27CO1      .|.................................................................................................11
|-3050                      H           * SW26FO9      .|....1................................1............................................................1
                                                       -----------------------------------------------------------------------------------------------------
In the first column a scale in kilobases (kb) is provided for the chromosome walk.  The chromosome walk above is aligned with the genetic map. 

In the second column Genetic loci assigned to cosmids are found.  Cosmids, which hybridize to another complementing
clone or to a clone, which hybridizes to a gene probe, are given in parantheses.  The parantheses
around the locus name implies that the cosmid listed by name in the same row has not been
shown to complement directly a mutation at the genetic locus or hybridize directly to a gene probe.
CEN denotes the predicted location of the centromere, while cen in lowercase denotes a centromeric repeat.

In the third column hybridization of the clone to each chromosome is scored as high (H), medium (M), or low (L).

In the fourth column the star (*) denotes that the cosmid was used as a probe.

In the fifth column is the clone name.

NOTES ON THE PHYSICAL MAP:



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