(none)

arnold at BSCR.UGA.EDU arnold at BSCR.UGA.EDU
Tue Jun 18 12:48:09 EST 1996


                                                                        Aspergillus nidulans Chromosome VIII - Version 2 - Aligned with Genetic Map - 124 Probe Pools
                                                                                                               MINIMAL MAP
                                                                                                           Estimated Coverage = 88%
                                                                                                           Estimated Physical Size =  4390 kb
KB            LOCUS     CLONE/CHR         CLONE                 10         20          30        40        50         60        70         80        90       100       110        120
                        HYBR.             NAME         ........|.|......|...|......|.|..|.........|.........|......|...|.........|...|......|.........|.........|.........|.......|..|....
                        12345678                       -----------------------------------------------------------------------------------------------------------------------------------
|-0           CEN              H        * SL21HO2      1.......|........|..........|.|.............................|.................|............................................|.......
|                       M MLHLHM          RL28DO8      11....1.|........|..........|.|.............................|.................|............................................|.......
|-50          (benA)           M        * SW31EO1      .1......|........|..........|.|.............................|.................|............................................|.......
|                              M          SL11FO6      .11.....|........|..........|.|.............................|.................|...........................................1|.......
|-100         tubA             H        * SW19FO8      ..1.....|........|..........|.|.............................|.................|............................................|.......
|                              L          SW11FO5      ..11....|.1......|..........|.|.............................|.................|............................................|.......
|                              M        * SL29HO9      ...11...|........|..........|.|.............................|.................|............................................|..1....
|        (qutCHDBGEAR)         L        * SW3OAO8      ....1...|........|..........|.|.............................|.................|............................................|.......
|-150                          M        * SL21DO1      ....11..|........|..........|.|.............................|.................|............................................|.......
|                              H          SL15GO7      1....11.|....1...|..........|.|.......................1.....|.................|...............1............................|.......
|-200                          M        * SW17AO3      ......1.|........|..........|.|.............................|.................|............................................|.......
|                             HL          RW27C1O      ....1111|........|...11....1|.|.1111......................1.|11..1......1.....|.....11...............1...............11....|.......
|-250                          H        * SW3OE11      .......1|........|..........|.|.............................|.................|............................................|.......
                                                       -----------------------------------------------------------------------------------------------------------------------------------
|-0                            M        * SLO8D11      ........|1.......|..........|.|.............................|.................|............................................|.......
|                       MLLML HM          RW16G12      ........|1111....|..........|.|......1......................|.................|............................................|1.....1
|-50                           H        * SL19EO3      ........|.1......|..........|.|.............................|.................|............................................|.......
|                              H          SW11DO1      ........|.11.....|.......11.|.|................1............|.................|.......................................1....|.......
|-100                          H        * SL16DO2      ........|..1.....|..........|.|.............................|.................|............................................|.......
|                              M          SWO4DO8      ........|..11....|..........|.|.............................|.................|............................................|.......
|-150         benA             M        * SL14B12      ........|...1....|..........|.|.............................|.................|..............................1.............|.......
|             benA             H          SL17HO1      ........|...11...|..........|.|.............................|.................|............................................|.......
|                              H        * SW18AO2      ........|....11..|..........|.|.............................|.................|............................................|.......
|-200                          M        * SLO8BO9      ........|.....1..|..........|.|.............................|.................|............................................|.......
|                             LM          RWO8EO4-d    ......1.|....1111|....1.....|.|1111...1...11....1.......1...|.11.1...1........|...11.....11..............1.................|.......
|                             LM          RWO8EO4      ......1.|....1111|....1.....|.|1111...1...11....1.......1...|.11.1...1........|...11.....11..............1.................|.......
|-250                          H        * SW17FO7      ........|.......1|..........|.|.............................|.................|............................................|.......
                                                       -----------------------------------------------------------------------------------------------------------------------------------
|-0                          L L          RWO7CO3      ........|........|1.........|.|.............................|.................|.................1..........................|.......
|                              M        * SLO7FO9      ........|........|11........|.|.............................|.................|............................................|.......
|-50                           M        * SL23DO8      ........|........|.1........|.|.............................|.................|............................................|.......
|                             MM          RL17CO1      ........|........|.11.......|.|.............................|.................|.......................................1....|.......
|-100                          L        * SLO6HO5      ........|........|..1.......|.|.............................|.................|............................................|.......
|                       MMHMH  H          RW23DO8      1.......|.1.1....|..111.....|.|........1....................|.................|............................................|.......
|-150                          H        * SW21CO6      ........|........|...1......|.|.............................|.................|............................................|.......
|                        MLMHHLH          RL19AO6      1.......|........|...11.....|.|.............................|.................|...1........................................|.......
|                              M        * SW18CO5      ........|........|....1.....|.|.............................|.................|............................................|.......
|-200                          H        * SW15BO2      ........|........|....11....|.|.............................|.................|............................................|.......
|                             ML          RWO9DO5      ........|........|.....11...|.|.............................|.................|............................................|.......
|-250                          L        * SL29G1O      ........|........|......1...|.|.............................|.................|............................................|.......
|                              M          SW31CO7      ........|........|......11..|.|.............................|.................|............................................|.......
|-300                          M        * SL11DO7      ........|........|.......1..|.|.............................|.................|............................................|.......
|                             HL          RW17BO9      ........|........|.......111|.|.............................|.................|............................................|.......
|                              M          SW27AO9      ........|........|.......111|.|.............................|.................|............................................|.......
|-350                          H        * SL13HO8      ........|........|.........1|.|.....................1.......|.................|............................................|.......
                                                       -----------------------------------------------------------------------------------------------------------------------------------
|-0                            H          SW15BO6      ........|........|..........|1|.............................|.................|............................................|.......
                                                       -----------------------------------------------------------------------------------------------------------------------------------
|-0           niaD             M        * SW3OCO7      ........|........|..........|.|1............................|.................|............................................|.......
|             niaD             H          SWO4H1O      ........|........|..........|.|11.............1.............|.................|............................................|.......
|-50                           M        * SWO1G12      ........|........|..........|.|.1...........................|.................|............................................|.......
|                              M          SW15FO5      ........|........|..........|.|.11....111...................|.................|......1.....................................|.......
|-100                          L        * SLO3HO2      ........|........|..........|.|..1..........................|.................|............................................|.......
|                             HL          RW29BO6      ....1...|........|..........|.|..11.........................|..1..............|............................................|....1..
|       (abaA,pCAN67)          L        * SLO4AO8      ........|........|..........|.|...1.........................|.................|............................................|.......
|-150                          L        * SW15FO6      ........|........|..........|.|...11........................|.................|............................................|.......
|             bimG             M          SWO2BO4      ........|........|..........|.|....11.......................|.................|............................................|.......
|-200                          H        * SL22D12      ........|........|..........|.|.....1.......................|.................|............................................|.......
|                              M          SW27B12      ........|........|..........|.|.....111.....................|.................|..........................................1.|.......
|                        L    HL          RL14FO3      ........|........|..........|.|......1......................|.................|1.........................................1.|.......
|                              M          SW28CO8      ........|....1...|..........|.|......11.....................|.................|............................................|.......
|                              H        * SLO5AO6      ........|........|..........|.|.......11....................|.................|............................................|.......
|-250                          M        * SLO8FO8      ........|........|..........|.|........1....................|.................|............................................|.......
|                              M          SW24DO2      ........|........|..........|.|.......1111..................|.................|............................................|.......
|-300                          L        * SLO8H11      ........|........|..........|.|.........1...................|.................|............................................|.......
|                              L          SLO6B11      ........|........|..........|.|.........11..................|.................|............................................|.......
|-350   phytochrome            L        * SL26B11      ........|........|..........|.|..........1..................|.................|............................................|.......
|             fwA              M          SL22AO3      ........|........|..........|.|..........11.................|.................|............................................|.......
|-400         fwA              H        * SL28DO4      ........|........|..........|.|...........1.................|.................|............................................|.......
|                         L   HM          RWO7GO2      ........|........|..........|.|...........11................|.................|...............................1............|.......
|-450         (brlA)           L        * SWO6HO1      ........|........|..........|.|............1................|.................|............................................|.......
|                         L M  H          RL24FO1      ........|........|..........|.|............11...............|.................|....1.......................................|.......
|-500         (nudA)           L        * SW28BO2      ........|........|..........|.|.............1........1......|.................|............................................|.......
|                        HLH HMM          RW19G12      ........|..11....|........1.|.|.1...........11...1.1.......1|.................|...........11...............................|.......
|                              H        * SW12AO7      ........|........|..........|.|..............11.............|.................|............................................|.......
|-550                          H        * SL29E12      ........|........|..........|.|..............11.............|.................|............................................|.......
|                             HM          RL15EO8      ........|........|..........|.|....1..........11............|.................|............................................|.......
|                              M        * SL25GO7      ........|........|..........|.|................1............|.................|............................................|.......
|-600                          M        * SW24A11      ........|........|..........|.|................11...........|.................|............................................|.......
|                              M          SL29BO9      ........|........|..........|.|.................11..........|.................|............................................|.......
|-650         ivoB             M        * SW28HO4      ........|........|..........|.|..................1..........|.................|............................................|.......
|                          H   H          RL23DO9      ........|........|.........1|.|1................111.........|.................|.....................11......1..............|.......
|                              M        * SWO8AO1      ........|........|..........|.|...................1.........|.................|............................................|.......
|-700                          H        * SWO6DO8      ........|........|..........|.|...................11........|.................|............................................|.......
|                        HMMHHMM          RL29GO8      ........|........|..........|.|....................11.......|.................|...........1...............................1|.......
|-750                          M        * SW24FO6      ........|........|..........|.|.....................1.......|.................|............................................|.......
|                             HL          RW31GO7      ........|........|..........|.|.....................11......|.................|............................................|.......
|-800                          H        * SL24BO8      ........|........|..........|.|......................1......|.................|............................................|.......
|                              H          SWO4GO6      ........|........|..........|.|......................111....|.................|............................................|.......
|                              M        * SL24AO5      ........|........|..........|.|.......................1.....|.................|............................................|.......
|-850         oxpA             M        * SLO8AO1      ........|........|..........|.|.......................11....|.................|............................................|.......
|                              M          SL29HO2      ........|........|........1.|.|........................11...|.........1.......|....1.......................................|.......
|-900         (H3,H4)          H        * SW23CO5      ........|........|..........|.|.........................1...|.................|............................................|.......
|                              H          SL13FO4      ........|........|..........|.|.........................11..|.................|............................................|.......
|-950                          H        * SL14E12      ........|........|..........|.|..........................1..|.................|............................................|.......
|                             LM          RL14AO2      ........|........|..........|.|..........................11.|.................|............................................|.......
|             uaY              H        * SL17FO1      ........|........|..........|.|...........................11|.................|............................................|.......
|-1000        uaY              M        * SL11FO7      ........|........|..........|.|............................1|.................|............................................|.......
                                                       -----------------------------------------------------------------------------------------------------------------------------------
|-0                            M        * SL22DO6      ........|........|..........|.|.............................|1................|............................................|.......
|                             LM          RWO7DO5      ........|........|..........|.|............1................|11...............|..11........................................|.......
|-50                           H        * SW19A1O      ........|........|..........|.|.............................|.1...............|............................................|.......
|                        MMH  MH          RW12H11      1.......|........|...1......|.|.......1...................1.|111.....1........|..........1......1.........................1|.......
|-100                          M        * SW1OG1O      ........|........|..........|.|.............................|..1..............|............................................|..1....
|                              H          SW14EO7      ........|........|....1.....|.|.............................|..111............|............................................|.......
|-150         aldA             M        * SLO9DO1      ........|........|..........|.|.............................|...1.............|............................................|.......
|             aldA             H          SL16DO5      ........|........|....11....|.|.............................|..111............|............................................|.......
|-200                          H        * SW12C11      ........|........|..........|.|.............................|....11...........|............................................|.......
|                             ML          RW21AO7      ........|........|..........|.|1............................|.....111.........|............................................|.......
|-250                          L        * SWO2CO2      ........|........|..........|.|.............................|......1..........|............................................|.......
|                           M HL          RW22CO3      ........|1.......|..........|.|1............................|.....111.........|............................................|.......
|-300                          M        * SL17A12      ........|........|..........|.|.............................|.......1.........|............................................|.......
|                              L          SW27DO8      ........|........|..........|.|.............................|.......11........|............................................|.......
|-350                          H        * SL27GO8      ........|........|..........|.|.............................|........1........|............................................|.......
|                        L     L          RL24DO9      ........|........|........11|.|.............................|........11.......|.......1........1...........................|.......
|-400                          M        * SWO8A1O      ........|........|..........|.|.............................|.........1.......|............................................|.......
|                            H M          RL3OD11      ........|........|..........|.|.............................|.........111.....|............................................|.......
|-450                          H        * SL19G11      ........|........|..........|.|.............................|..........1......|............................................|.......
|                              M          SW24EO4      ........|........|..........|.|.............................|..........11.....|.........1..................................|.......
|                              L        * SW14EO1      ........|........|..........|.|.............................|...........1.....|............1...............................|.......
|-500                          H        * SL18H1O      ........|........|..........|.|.............................|...........11....|............1...............................|.......
|                         L  MML          RL18BO3      ........|........|........1.|.|.............................|.1..........11...|..................1.........................|.......
|-550                          H        * SLO5H12      ........|........|..........|.|.............................|.............1...|............................................|.......
|                              L          SWO1DO6      ........|........|..........|.|.............................|.............11..|.....................1......................|.......
|-600                          M        * SL14E11      ........|........|..........|.|.............................|..............1..|............................................|.......
|                         H    M          RW18AO9      ........|........|..........|.|.............1.....1.........|11.....1......11.|......1........1........1...................|.......
|                              M        * SL28G11      ........|........|..........|.|.............................|...............1.|............................................|.......
|-650                          M        * SL18G1O      ........|........|..........|.|.............................|...............11|............................................|.......
|                              L          SL25G12      ........|........|..........|.|.............................|................1|............................................|.......
                                                       -----------------------------------------------------------------------------------------------------------------------------------
|-0                            H          SWO8C1O      ........|........|..........|.|.............................|.................|111.11......................................|.......
|             (spoC1)          M        * SL1OE1O      ........|........|..........|.|.............................|.................|111.....................1...................|.......
|                              M        * SL21D1O      ........|........|..........|.|.............................|.................|.11.........................................|.......
|-50                           M        * SL17AO1      ........|........|..........|.|.............................|.................|..1.........................................|.......
|                              H          SW11CO6      ........|........|..........|.|.............................|1................|1111........................................|.......
|-100                          H        * SL29GO5      ........|........|..........|.|.............................|.................|..11........................................|.......
|                       LML HL M          RW26AO8      1.......|........|..1.1.....|.|.............................|.................|...11.......................................|.......
|                              H        * SL14HO5      ........|........|..........|.|.............................|.................|....11......................................|.......
|-150                          L        * SW3OEO9      ........|........|..........|.|.............................|.................|.....1......................................|.......
|                             ML          RW14AO8      ........|........|..........|.|.............................|.................|.....111....................................|.....1.
|-200         (tubA)           M        * SWO5BO3      ........|........|..........|.|.............................|.................|......1.....................................|.......
|                         L L LL          RLO6HO2      ........|........|..........|.|.............................|.................|.....111....................................|.......
|-250         (riboB)          M        * SL13A1O      ........|........|..........|.|.............................|.................|.......1....................................|.......
|                             ML          RWO9GO6      ........|........|..........|.|.............................|.................|.......11...................................|..1....
|-300                          M        * SLO5D1O      ........|........|..........|.|.............................|.................|........1...................................|.......
|                          M  ML          RW28CO3      1...1...|....1...|11.......1|.|..........11111..1.....1.111.|...11..1...1.....|.11...1111......1.1..1.111111...1....111....|.......
|-350         trpC             M        * SW22AO8      ........|........|..........|.|.............................|.................|.........1..................................|.......
|                          M LHL          RW28E1O      ........|........|..........|.|.............................|.............1...|.........11.................................|.......
|-400                          M        * SLO9BO1      ........|........|..........|1|.............................|.................|..........1.................................|.......
|                        LMM M L          RW23CO9      ........|........|..........|.|.1............1..............|.................|..........111...............................|.......
|-450                          M        * SWO8A12      ........|........|..........|.|.............................|..1..............|...........1................................|.......
|                        HMM MMM          RW23B12      ........|........|..........|.|.............................|.................|..........111...............................|.......
|-500                          H        * SWO7FO2      ........|........|.......1..|.|.............................|.................|............1...............................|.......
|                          M   L          RW29DO8      ........|.......1|.....1....|.|.............................|.................|............11.............................1|.......
|-550                          M        * SWO8DO2      ........|........|..........|.|.............................|.................|.............1..............................|.......
|                        M M  LH          RW21AO4      1...11..|....1...|..........|.|.11.........111..111...11.1..|....11.1...1...1.|..1...1.1111.11.........1111.1...1...111.1..|.......
|                              M        * SL25FO1      ........|........|..........|.|.............................|.................|..............11............................|.......
|                              M        * SWO5HO7      ........|........|..........|.|.............................|.................|...............1............................|.......
|-600                          M        * SW25EO3      ........|........|..........|.|.............................|.................|...............11...........................|.......
|                        MLH  MM          RWO2BO2      11......|........|..........|.|..............1...11.......1.|..1.1............|......1.........11.....................1....|.......
|                              L        * SL27BO4      ........|........|..........|.|.............................|.................|.................1..........................|.......
|-650                          M        * SW11A12      ........|........|..........|.|.............................|.................|.................11.........................|.......
|                              M          SWO3DO2      ........|........|..........|.|.............................|.................|.................111........................|.......
|-700                          M        * SL22DO3      ........|........|..........|.|.............................|.................|...................1........................|.......
|                              H          SW21AO2      ........|........|..........|.|.............................|.................|...................11.......................|.......
|-750                          H        * SL29AO8      ........|........|..........|.|.............................|.................|....................1.......................|.......
|                              M          SW19AO3      ........|........|..........|.|.............................|.................|....................11......................|.......
|-800                          M        * SL16CO8      ........|........|..........|.|.............................|.................|.....................1......................|.......
|                         L    H          RW12AO3      ........|........|......1...|.|.............................|.................|.....................11.....................|.......
|                              M        * SL31CO9      ........|........|..........|.|.............................|.................|......................1.....................|.......
|-850                          H        * SW26DO5      ........|........|..........|.|.............................|.................|......................11....................|.......
|             pelA             L          SL3OCO5      ........|........|..........|.|.............................|.................|.......................11...................|.......
|-900                          M        * SW12DO7      ........|........|..........|.|.............................|.................|........................1...................|.......
|                            MLH          RLO4DO4      ........|........|..........|.|.............................|.................|........................111.................|.......
|-950                          L        * SW13AO5      ........|........|..........|.|.............................|.................|.........................1..................|.......
|                              H          SW29GO6      ........|........|.....1....|.|.............................|...11......1.....|.........................11...1.............|.......
|-1000                         L        * SLO6H11      ........|........|..........|.|.............................|.................|..........................1.................|.......
|                           M  L          RWO5DO4      ........|..1.....|..........|.|...........1.................|.................|........................1.11................|.......
|                              M        * SW17F12      ........|........|..........|.|.............................|.................|...........................11...............|.......
|-1050                         H        * SL21GO2      ........|........|..........|.|.............................|.................|...........................11...............|.......
|                              L          SL32E1O      ........|........|..........|.|.............................|.................|............................11..............|.......
|-1100                         M        * SWO4HO5      ........|........|..........|.|.............................|.................|.......1.....................1..............|.......
|                              H          SW16EO1      ........|........|..........|.|.............................|.................|.............................11.............|.......
|-1150                         H        * SW11BO9      ........|........|..........|.|.............................|.................|..............................1.............|.......
|                             ML          RL16AO7      ........|........|..........|.|.............................|.................|..............................11............|.......
|                          LH  L          RW19HO9      ........|........|..........|.|.............11..............|.................|......1........................11...........|.......
|-1200        (facB)           M        * SWO2DO8      ........|......1.|..........|.|.............................|.................|................................1...........|.......
|                              L          SW27EO4      ........|........|..........|.|.............................|.................|................................111.........|.......
|                              L        * SWO6FO9      ........|........|..........|.|.............................|.................|.................................1..........|.......
|-1250                         M        * SL31A1O      ........|........|..........|.|.............................|.................|.................................11.........|.......
|                             HL          RL27FO1      ........|........|..........|.|.............................|.................|..................................11........|.......
|-1300        (palB)           L        * SL26H11      ........|........|..........|.|.............................|.................|...................................1........|.......
|                             HL          RW11CO4      ........|.1......|..........|.|.............................|.................|..................................111.......|.......
|                              L        * SL22GO8      ........|........|..........|.|.............................|.................|....................................1.......|.......
|-1350                         H        * SWO3G12      ........|........|..........|.|.............................|.................|....................................11......|.......
|                              L          SW19AO9      ........|........|..........|.|.............................|.................|....................................111.....|.......
|-1400                         M        * SL2OG12      ........|........|..........|.|.............................|.................|......................................1.....|.......
|                              M          SWO4HO9      ........|........|..........|.|.............................|.................|....1.................................11....|.......
|-1450                         H        * SW15BO4      ........|.......1|..........|.|.............................|.................|......................1................1....|.......
|                              H          SW21C11      ........|........|..........|.|........1....................|.................|........1..............................11...|.......
|-1500                         H        * SL22HO5      ........|........|..........|.|.............................|.................|........................................1...|.......
|                              H          SL28BO6      ........|........|..........|.|.............................|.................|........................................11..|.......
|-1550                         M        * SW16EO8      ........|........|..........|.|.............................|.................|.........................................1..|.......
|                       MLMLMM L          RW23FO1      ........|........|..........|.|.............................|.................|.........................................11.|.......
|                       LMHM HML          RWO7A1O      ..1.....|........|..........|.|..1..........................|.................|..........................................1.|.......
|                        MHML LL          RW15HO9      ........|........|..........|.|.............................|.................|.........................................111|.......
|-1600                         M        * SW15CO7      ........|........|..........|.|.............................|.................|...........1...............................1|.......
                                                       -----------------------------------------------------------------------------------------------------------------------------------
|-0                            H        * SLO6GO5      ........|........|..........|.|.............................|.................|............................................|1......
|                          MHM L          RLO5BO7      ........|1.......|....1....1|.|........................11...|.......1.........|............................................|11.....
|                              M        * SLO5HO7      ........|........|..........|.|..............1..............|..1..............|............................................|.11....
|-50                           H        * SL32DO1      ........|........|..........|.|.............................|.................|............................................|..1....
|                              L          SWO1FO3      ........|........|..........|.|.............................|.................|............................................|..11...
|-100                          M        * SL16E1O      ........|........|..........|.|.............................|.................|............................................|...1...
|                         M   HM          RL31GO8      ........|........|..........|.|......11................1....|.......11........|1.........1......1............11..........1.|11111.1
|-150                          M        * SLO9C11      ........|........|..........|.|.............................|.................|............................................|....1..
|                              M          SL13HO9      ........|........|..........|.|.............................|.................|............................................|....11.
|-200                          H        * SL15AO6      ........|........|..........|.|.............................|.................|............................................|.....1.
|                         M  MHL          RW14GO6      ........|........|..........|.|...............11............|.................|............................................|.....11
|-250 phytochrome,(nirA)       L        * SL12CO5      ........|........|..........|.|.............................|.................|............................................|......1
                                                       -----------------------------------------------------------------------------------------------------------------------------------
In the first column a scale in kilobases (kb) is provided for the chromosome walk.  The chromosome walk above is aligned with the genetic map. 

In the second column Genetic loci assigned to cosmids are found.  Cosmids, which hybridize to another complementing
clone or to a clone, which hybridizes to a gene probe, are given in parantheses.  The parantheses
around the locus name implies that the cosmid listed by name in the same row has not been
shown to complement directly a mutation at the genetic locus or hybridize directly to a gene probe.
CEN denotes the predicted location of the centromere, while cen in lowercase denotes a centromeric repeat.

In the third column hybridization of the clone to each chromosome is scored as high (H), medium (M), or low (L).

In the fourth column the star (*) denotes that the cosmid was used as a probe.

In the fifth column is the clone name.

NOTES ON THE PHYSICAL MAP:



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