(none)

arnold at BSCR.UGA.EDU arnold at BSCR.UGA.EDU
Tue Jun 18 12:47:56 EST 1996


                                                                      Aspergillus nidulans Chromosome VII - Version 2 - Aligned with Genetic Map - 123 Probe Pools
                                                                                                            MINIMAL MAP
                                                                                                        Estimated Coverage = 100%
                                                                                                        Estimated Physical Size = 4240 kb
KB            LOCUS     CLONE/CHR         CLONE                10         20        30        40        50        60         70        80          90       100       110       120
                        HYBR.             NAME         .........|......|...|.........|.........|.........|.........|.........||.........|........|.||.........|.........|.........|...
                        12345678                       -------------------------------------------------------------------------------------------------------------------------------
|-0                           M         * SL18BO5      1...............|.....................................................|...................|.|..................................
|                             M           SW18FO2      11..............|.....................................................|...................|.|..................................
|-50          alcC            L         * SWO3B11      .1..............|.....................................................|...................|.|..................................
|             alcAR      MHMLHMM          RW12F1O      .11.............|.....................................................|...................|.|.....................1............
|-100                         H         * SLO8E11      ..1.............|.....................................................|...................|.|..................................
|                       MMHH HML          RW16BO2      ..11............|.....................................................|...................|.|..................................
|                             M         * SW21D12      ...11...........|.....................................................|...................|.|..................................
|-150                         H         * SL1OFO2      ....1...........|.....................................................|...................|.|..................................
|                             H           SW12G1O      ....11..........|.....................................................|...................|.|..................................
|-200                         H         * SLO9HO3      .....1..........|.....................................................|...................|.|..................................
|                             HL          RL12H1O      .....11.........|...1.................................................|1..................|.|.....................1............
|                             H         * SL1OH1O      ......11........|.....................................................|...................|.|..................................
|                             H         * SL3OG11      .......1........|.....................................................|...................|.|..................................
|                             M         * SL19A11      .......11.......|.....................................................|...................|.|..................................
|-250                         L         * SLO8CO1      ........11......|.............................................1.......|...................|.|..................................
|                             LM          RWO8EO4      1........11....1|..11.1.1.....11.11......11...1......................1|.11.1..............|.|......1111...................1....
|                             ML          RL15CO6-d    ..........1.....|.....................................................|...................|.|..................................
|             cen       HMHHHMMH          OW14AO2      .......11.11...1|.......1......1..11.............1....................|...................|.|11....................1...........
|-300                         H         * SW18C11      ...........1....|.....................................................|...................|.|..................................
|                             M           SW17GO5      ...........11...|.....................................................|...................|.|..................................
|                             H         * SW1ODO5      ............11..|.....................................................|...................|.|..................................
|-350                         M         * SL26E11      .............1..|.....................................................|...................|.|..................................
|                             L           SW11GO6      ...1.........11.|.....................................................|...................|.|..................................
|                             M         * SW3OFO7      ..............1.|.....................................................|...................|.|..................................
|-400                         H         * SWO7H1O      ..............11|.....................................................|...................|.|..................................
                                                       -------------------------------------------------------------------------------------------------------------------------------
|-0                           M         * SW17DO7      ................|1....................................................|...................|.|..................................
|                             M           SW22DO9      ................|11...................................................|...................|.|..................................
|-50                          M         * SLO4E11      ................|.1...................................................|...................|.|..................................
|                             M           SWO7HO6      ...1....1.......|111..........1..1...1......1...1......1......1.......|1111...............|.|.........................11.......
|-100                         M         * SL29DO2      ................|..1..................................................|...................|.|..................................
|                       MLMMHMMM          OL18A11      ................|..11.................................................|...................|.|..................................
|-150                         H         * SW31DO2      ................|...1.................................................|...................|.|..................................
|                       L  L  LH          RW21DO6      ................|...11................................................|...............1...|.|..................................
|-200         CEN             L         * SW11AO9      ................|....1................................................|...................|.|..................................
|             cen       MMHMHHLM          OW18FO3      ................|.1.111...............................................|...................|.|....................1...1.........
|-250                         H         * SLO6F12      ................|.....1........1......................................|...................|.|..................................
|                             M           SWO9AO3      ................|.....11..............................................|...................|.|..................................
|-300                         L         * SW26BO8      ................|......1..............................................|...................|.|..................................
|                          M LHL          RW28E1O      ................|......111............................................|...................|.|..................................
|-350                         L         * SWO3FO5      ................|.......1.............................................|...................|.|..................................
|                          LLHMM          RL25F11      ................|.......11............................................|...................|.|..................................
|-400                         M         * SL26C12      ................|........1............................................|...................|.|..................................
|                             H           SL14G1O      ................|........111..........................................|...................|.|..................................
|                             M         * SL3OBO9      ................|.........1...........................................|...................|.|..................................
|-450                         M         * SLO8DO1      ................|.........11..........................................|...................|.|..................................
|                             HL          RW13BO7      ............11..|..........111.........1..............................|..............11...|.|..................................
|-500                         M         * SL1OHO9      ................|...........1.........................................|...................|.|........................1.........
|                             M           SWO9HO3      ................|...........111.......................................|...................|.|..................................
|                             H         * SL15HO2      ................|............11.....................111...............|...................|.|..................................
|-550                         M         * SWO1A11      ................|.............1.......................................|.....1.............|.|..................................
|                        M    L           RWO8DO5      ................|.............11.........1...........1................|........1......1...|.|......................1......1....
|-600                         M         * SLO3B11      ................|..............1......................................|...................|.|..................................
|                             L           SL11AO7      ................|..............11.....................................|.............1.....|.|..............1............1......
|-650                         L         * SWO4B11      ................|...............111...................................|...................|.|..................................
|                             HL          RW28BO8      ................|...............111...................................|...................|.|..................................
|-700                         M         * SW17DO9      ................|.................1...................................|...................|.|..................................
|                             M           SW17CO5      ................|.................1111................................|...................|.|..................................
|-750                         M         * SL22E1O      ................|..................1..................................|...................|.|..................................
|                             H           SL21FO6      ................|..................11.................................|...................|.|..................................
|-800                         M         * SWO2DO4      ................|...................1.................................|...................|.|..................................
|                       L L   L           RW28FO5      ................|...................11................................|...................|.|................................1.
|                             M         * SL32B11      ................|..................1.1................................|...................|.|..................................
|-850                         H         * SLO6EO8      ................|....................11...............................|...................|.|..................................
|                       MLLML HM          RW16G12      ................|..........11.........11..............................|.............111...|.|..................................
|-900                         M         * SLO3BO7      ................|......................1..............................|...................|.|..................................
|                       M HLHHHM          RL12F11      ................|......................11...............1.............|...................|.|..................................
|-950                         M         * SL25EO8      ................|.......................1.............................|...................|.|..................................
|                             L           SW1OHO5      ................|.......................11............................|.................1.|.|..................................
|-1000                        M         * SLO7FO6      ................|........................1............................|...................|.|..................................
|                             L           SW23GO9      ................|.......................111...........................|...................|.|..................................
|-1050                        M         * SL26F11      ................|.........................11..........................|...................|.|..................................
|                             M           SW12BO7      ................|.........................11..........................|...................|.|..................................
|                             M         * SL14EO2      ................|..........................1..........................|...................|.|..................................
|-1100                        H         * SWO7E1O      ................|..........................1111.......................|...................|.|..................................
|                             M           SWO2DO7      ................|...........................11........................|...................|.|..................................
|                             H         * SL15FO7      ................|............................11.......................|...................|.|..................................
|-1150                        M         * SW26A1O      ................|............................11.......................|...................|.|..................................
|                        HLH HMM          RW19G12      ..............1.|................1.........1..111.1................1..|.........1...11....|.|..................................
|-1200        (chsE)          M         * SW26A11      ................|..............................1......................|...................|.|..................................
|                        MLH  MM          RWO2BO2      ...........1...1|..............................111...1............1...|...................|.|11......1.............1...........
|-1250                        H         * SW28DO9      ................|...............................1.1...................|...................|.|..................................
|                        ML M ML          RWO7A11      ................|...............................11....................|...................|.|..................................
|-1300                        M         * SW1OGO7      ................|................................1....................|...................|.|......1...........................
|                             M           SW11EO9      ................|................................11...................|...................|.|..................................
|-1350                        H         * SW1ODO3      ................|.................................1...................|...................|.|..................................
|                             L           SW28F12      ................|.................................111.1.........1.....|...................|.|..................................
|                             H         * SLO9E1O      ................|..................................11.................|...................|.|..................................
|                             M         * SL21DO2      ................|...................................1.................|...................|.|..................................
|-1400                        M         * SL32GO1      ................|...................................11................|...................|.|..................................
|                         L L LL          RLO6HO2      ................|...................................111...............|...................|.|..................................
|-1450                        M         * SL21C11      ................|...................................1.1...............|...................|.|..................................
|                             H           SL12HO8      ................|.....................................11..............|...................|.|..................................
|                             M         * SWO2G12      ................|......................................11.............|...................|.|..................................
|                             M         * SL31FO7      ................|.......................................1.............|...................|.|..................................
|-1500                        M         * SW14AO6      ................|.......................................11............|...................|.|..................................
|                             MH          RLO9DO5      ................|.......................................111...........|...............1...|.|........1.........................
|-1550                        M         * SWO9CO2      ................|.........................................1...........|...................|.|..................................
|                         M   M           RL28E1O      ................|.........................................111.........|...................|.|..................................
|-1600                        H         * SWO3GO2      ................|..........................................1..........|...................|.|.........................1........
|                       L H MMM           RL18FO3      ................|..........................................11.........|...................|.|..................................
|                             M         * SWO1HO9      ................|...........................................11........|...................|.|...........................1......
|-1650                        M         * SLO9DO6      ................|............................................1........|...................|.|..................................
|                        HMMMML           RW15BO7      ................|.....1......................................11.......|.1.................|.|..................................
|-1700                        H         * SLO8G12      ................|.............................................1.......|...................|.|..................................
|                             H           SW28G1O      ................|.............1...............................11......|...1...............|.|..................................
|-1750                        M         * SWO9AO6      ................|.............................................11......|...................|.|..................................
|                             H           SW16EO5      ................|............11..1.............................11.....|...................|.|..................................
|                             MH          RW25HO3      ................|..................1............................11....|...................|.|..........................1.......
|-1800                        M         * SW14DO2      ................|................................................1....|...................|.|..................................
|                             H           SLO9CO4      .............1..|.......................................1........11...|.....1.............|.|.................................1
|-1850        calmodulin      M         * SL28AO7      ................|.................................................1...|...................|.|..................................
|                             L           SWO3GO5      ................|.................................................11..|.1.................|.|..................................
|                             L         * SW18G1O      ................|..................................................1..|...................|.|..................................
|-1900        (H3)            M         * SWO1FO9      ................|..................................................11.|...................|.|..................................
|                        H    M           RLO5EO4      ................|...................................................11|...................|.|..............................1...
|-1950                        H         * SW18E12      ................|....................................................1|...................|.|..................................
                                                       -------------------------------------------------------------------------------------------------------------------------------
|-0           (nimO)          L         * SW26FO5      ................|.....................................................|1..................|.|..................................
|                       H MH  M           RL12B11      ...........1....|..........1..........................................|11..........1......|.|..................................
|-50                          M         * SLO8EO2      ................|.....................................................|.1.................|.|..................................
|                       MH    L           RW1OEO7      ................|.....................................................|.11...........1....|.|..................................
|             wetA            H         * SL2OF11      ................|.....................................................|..11...............|.|..................................
|-100         wetA            L         * SLO7CO3      ................|.....................................................|...1...............|.|..................................
|                             HL          RW29BO6      ...............1|.....................................................|...11..............|.|......1........1..................
|-150                         H         * SWO6FO1      ................|.....................................................|....1..............|.|..................................
|                             HL          RW27C1O      ....1...........|...11............11........1.1.....11................|.1.111.............|.|.1...11.1.............11..11......
|                         LM  LM          RW22GO9      1......1........|...1..1.......1..11........1.111....1................|...1111............|.|1.......11........................
|                             H         * SW11D12      ................|.....................................................|......111..........|.|..................................
|                             H         * SW26EO3      ................|.....................................................|.......1...........|.|..................................
|-200                         L         * SW26GO2      ................|.....................................................|.......11..........|.|..................................
|                        HMHHHL           RWO5FO8      ................|.....................................................|........11.........|.|..................................
|-250                         H         * SW31B11      ................|.....................................................|.........1..1......|.|..................................
|                             H           SW1OA12      ................|.....................................................|.........11........|.|........................1.........
|-300                         H         * SW11EO3      ................|.....................................................|..........1........|.|..................................
|                          M  HL          RW12CO3      ................|.....................................................|..........11.......|.|..................................
|-350    palF,(pCAN26)        M         * SWO2GO8      ................|....1................................................|...........1.......|.|..................................
|                       HM    M           RLO9FO7      ................|.....................................................|...........11......|.|..................................
|-400         nimU            L         * SWO4FO1      ................|.....................................................|............1......|.|..................................
|                       HHHHHHL           RW27H1O      ..1.............|.....................................................|............11.....|.|.......................1..........
|                             L           SW13AO8      ................|.....................................................|.............11....|.|................1.................
|                       MMH MMLM          RW13A1O      ................|..........111...............................1........|..............11...|.|..................................
|-450                         M         * SL19H11      ................|.....................................................|..............1....|.|.......................1..........
|                             H           SLO4BO9      ................|...........1...................1.1...................|..............11...|.|..................................
|                             M         * SL21F11      .....1..........|........1............................................|...............11..|.|..................................
|-500                         H         * SW31D1O      ................|.....................................................|................1..|.|..................................
|                             M           SWO9EO3      ................|.....................................................|................111|.|..................................
|                             H         * SWO5A12      ................|.....................................................|.................11|.|..................................
|-550                         M         * SL31HO1      ................|.....................................................|.................11|.|..................................
|                             LL          RL1OAO6      ................|.....................................................|..................1|.|..................................
                                                       -------------------------------------------------------------------------------------------------------------------------------
|-0                           M         * SLO5B12      ................|.....................................................|...................|1|..................................
                                                       -------------------------------------------------------------------------------------------------------------------------------
|-0                           M         * SL26GO9      ................|..................................1..................|...................|.|1.................................
|                        MMH  MH          RW12H11      .1.............1|....1..1.........11.....11...........................|...................|.|11................................
|-50                          H         * SL25FO5      ................|.....................................................|...................|.|.1................................
|                             L           SW27CO8      ................|.....................................................|...................|.|.11...............................
|-100                         H         * SWO7EO5      ................|.....................................................|...................|.|..1...............................
|                             M           SW18A11      ................|.................................................1...|...................|.|..11..............................
|             gatA            L         * SL18EO2      ................|.....................................................|...................|.|...1..............................
|-150         alcC            H         * SWO3AO3      ................|.....................................................|...................|.|...11.............................
|                             M           SLO7HO5      ................|.....................................................|...................|.|....11............................
|-200                         M         * SWO4D11      ................|.....................................................|...................|.|.....1............................
|                         M   M           RW21BO3      ................|.....................................................|...................|.|.....11...........................
|                             L         * SW11AO2      ................|.....................................................|...................|.|......1...........................
|-250                         H         * SWO8BO4      ................|.....................................................|...................|.|......11..........................
|                         H H L           RL14AO4      ................|..........1.....1......1................1............|...................|.|.......11.........................
|-300                         M         * SL3OAO4      ................|.....................................................|...................|.|........1.........................
|                             M           SWO1DO2-d    ....1.........11|..............................1............1.........|...................|.|.......111..............11........
|-350                         L         * SWO2D12      ................|.....................................................|...................|.|.........1........................
|                             L           SW26FO7      ................|..........................1..........................|...................|.|.........11.......................
|-400                         H         * SW3OAO1      ................|.....................................................|...................|.|..........1.......................
|                             M           SW1OH1O      ................|.....................................................|...................|.|..........11......................
|-450                         M         * SWO1BO2      ..1.............|.................................................1...|...................|.|...........1......................
|                            HH           RL32DO9      ................|........1............................................|...................|.|...........11.....................
|                             M         * SL29GO2      ................|.....................................................|...................|.|............1.....................
|-500                         M         * SL28B12      ................|.................1...................................|...................|.|............11....................
|                         M   HM          RL31GO8      ..1.....1.......|.......1...1.........11111.............1.............|...................|.|1...........11111.............1...
|-550                         M         * SL17C11      ................|....................................1................|...................|.|..............1...................
|                         M   HM          RL31GO8-d    ..1.....1.......|.......1...1.........11111.............1.............|...................|.|1...........11111.............1...
|-600                         L         * SWO1FO2      ................|.....................................................|...................|.|......1........1..................
|                        HLHMHL           RW16EO6      111.............|1............11.11111.........1........11............|........1..........|.|........1......11......1..1......1
|                             H         * SW13BO8      ................|.....................................................|...................|.|................1.................
|-650                         H         * SL31BO4      ................|.....................................................|...................|.|................11................
|                          M  ML          RW28CO3      ........1.1.....|11......1....11............1...11...111.11.1..1...111|1..1...............|.|.1.....1111......11..111111.1..11.
|                             L           SLO9GO5      ................|.....................................................|...................|.|..................1...............
|                         M   M           RW17G11      ................|.............................11......................|...................|.|..................11..............
|-700                         M         * SL2OB12      ................|.....................................................|...................|.|...................1..............
|                             M           SWO2A11      ................|.....................................................|...................|.|...................11.............
|-750                         M         * SL27HO3      ................|.....................................................|...................|.|....................1.............
|                             H           SL11F12      ................|.....................................................|...................|.|....................11............
|-800                         H         * SL26BO6      ................|.....................................................|...................|.|.....................1............
|                             M           SL28HO5      ................|.....................................................|...................|.|.....................11...........
|-850                         H         * SW28D11      ................|.....................................................|...................|.|......................1...........
|                        LL   M           RW13D1O      ................|............1........................1...............|...................|.|......................11..........
|-900                         H         * SWO6BO7      ................|.....................................................|...................|.|.......................1..........
|                             M           SWO6HO8      ................|.....................................................|...................|.|.......................11.........
|-950                         M         * SWO9HO6      ................|.....................................................|...................|.|........................1.........
|                             M           SWO1DO2      ....1.........11|..............................1............1.........|...................|.|.......111..............11........
|-1000                        M         * SL15AO5      ..............1.|.....................................................|...................|.|.........................1........
|                             MM          RW17DO5      ................|......1............1.................................|1..................|.|.........................11.......
|                             M         * SWO3HO9      ................|.....................................................|...................|.|..........................11......
|-1050                        H         * SL3OG1O      ................|.....................................................|...................|.|...........................1......
|                             M           SL23HO6      ................|.....................................................|...................|.|...........................11.....
|-1100                        H         * SW13DO8      ................|.....................................................|...................|.|............................1.....
|                             L           SW18FO1      ................|.....................................................|...................|.|............................11....
|-1150                        M         * SW26HO3      ................|.....................................................|...................|.|.............................1....
|                             L           SW28GO5      ................|.....................................................|...................|.|.............................111..
|-1200                        M         * SLO4E1O      ................|.....................................................|...................|.|..............................11..
|                           LHH           RL19F1O      ................|..................1.1................................|...................|.|...............................11.
|-1250                        L         * SLO8BO1      ................|....................1................................|...................|.|................................1.
|                            LM           RL26CO1      ................|.1...................................................|...................|.|................................11
|-1300                        M         * SLO3B1O      ................|.....................................................|...................|.|.................................1
                                                       -------------------------------------------------------------------------------------------------------------------------------
In the first column a scale in kilobases (kb) is provided for the chromosome walk.  The chromosome walk above is aligned with the genetic map. 

In the second column Genetic loci assigned to cosmids are found.  Cosmids, which hybridize to another complementing
clone or to a clone, which hybridizes to a gene probe, are given in parantheses.  The parantheses
around the locus name implies that the cosmid listed by name in the same row has not been
shown to complement directly a mutation at the genetic locus or hybridize directly to a gene probe.
CEN denotes the predicted location of the centromere, while cen in lowercase denotes a centromeric repeat.

In the third column hybridization of the clone to each chromosome is scored as high (H), medium (M), or low (L).

In the fourth column the star (*) denotes that the cosmid was used as a probe.

In the fifth column is the clone name.

NOTES ON THE PHYSICAL MAP:



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