Codon usage chart

Matthew Sachs msachs at AMETHYST.CBS.OGI.EDU
Thu Oct 9 16:38:17 EST 1997


Codon preferences tables for Aspergilli, Trichoderma and many other
organisms can be found at:

http://www.dna.affrc.go.jp/~nakamura/

For A. nidulans, use the current name, Emericella nidulans!

This site also has data concerning organellar and viral codon usage.

Further description of this work:

Nakamura, Y., Wada, K., Wada, Y., Doi, H., Kanaya, S., Gojobori, T., and
Ikemura, T. (1996). Codon usage tabulated from the international DNA
sequence databases. Nucl. Acids Res. 24, 214-215.

>Hello, I am trying to locate the codon usage chart for Aspergillus or
>Trichoderma.
>Can anybody help me?
>
>Thanks,
>
>Jerome
>

-----------------------------------------------------------
Matthew Sachs
Department of Biochemistry and Molecular Biology
Oregon Graduate Institute of Science & Technology
20000 NW Walker Road
P.O. Box 91000
Portland, OR  97291-1000
503 690-1487 Phone
503 690-1464 Fax
http://www.cbs.ogi.edu/~msachs/
NEW => msachs at bmb.ogi.edu <= NEW





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