rat codon frequency tables

harper at csc.fi harper at csc.fi
Thu Mar 21 12:28:56 EST 1991

In article <1991Mar20.221406.26446 at bronze.ucs.indiana.edu>, gilbertd at cricket.bio.indiana.edu (Don Gilbert) writes:
Dg> In article <9103202154.AA20653 at gcg.com> dkatz at GCG.COM (Don Katz - Genetics Computer Group) writes:
Dg>>> There is a tabulation in Nucleic Acids Research 14:r151-r197, 1986, which
Dg>>> includes quite a number of species.  I am not aware of any update on that
Dg>>> tabulation.
Dg>>Most recent tabulation is Wada et al., Codon usage tabulated from the
Dg>>GenBank genetic sequence data. NAR 18(suppl):2367-2411, 1990
Dg> To refresh our network memory, Mike Cherry has a more recent set of codon
Dg> tables for 50 species available in useable, electronic form.  Try anonymous
Dg> ftp to:
Dg> frodo.mgh.harvard.edu                   Codon usage tables for all major species
Dg>                          (GCG format)
Dg> ( [.codon] )
Dg> Contact: Mike Cherry*, cherry at frodo.mgh.harvard.edu

In Europe you can get the codon usage tables from bioftp.unibas.ch
Contact: Reinhard Doelz  at  Doelz at urz.unibas.ch

You will also find a few other interesting databases at that site.


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