Unique Numerical Protein Representation

Keith Elliston elliston at msdrl.com
Tue Jun 9 13:33:29 EST 1992


POSTMAST at GUNBRF.BITNET writes:
: The PIR staff have had several inquiries recently about a supposedly large
: number of redundant sequences in the PIR database.  These questions arose
: from an apparently common misinterpretation of a table in a message posted
: to GENBANK-BB by Warren Gish at the NCBI on 13 May 1992.
: 

How were these comparisons done?  Is there a PD program available that will
eliminate redundant sequences in databases by sequence identity?  If so, I
am interested in getting a copy of it.  I have been meaning to write one
myself, but never seem to get around to it.

Thanks

Keith
elliston at msdrl.com
-- 
Keith O. Elliston            elliston at msdrl.com           uunet!av8tr!elliston
AA5A/U  N9734U             elliston at mbcl.rutgers.edu     elliston at biovax.bitnet
"Beware of pseudo-experts with a mission and a grudge, especially if they are
 lawyers pretending to be scientists." -- H.W. Lewis in 'Technological Risk'



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