database question

Rafael N Szeinfeld szeinfel at fox.cce.usp.br
Mon Jan 31 06:56:02 EST 1994



On 29 Jan 1994, Pavel Sova wrote:

> In article <kodak.1110134956B at tigger.jvnc.net>,
> Joe Kaufman <kodak at tigger.jvnc.net> wrote:
> >In Article <1994Jan27.225745.12757 at mnemosyne.cs.du.edu>,
> >pfinerty at nyx10.cs.du.edu (fork) wrote:
> >>
> >>hey folks, i'm looking for a protein database that could be queried using
> >>only the amino acid composition of a protein. anyone know if such a thing
> >>exists? 
> >>
> >>
> >>thanks for the tips,
> >>
> >>-patrick finerty
> 
> ...stuff deleted...
> 
> Patrick,
> you can search by e-mail all possible databases available through ncbi
> server by program called blast. Blast searches nucleotide or protein
> sequence databases according to program called (blastn or blastp) in your
> e-mail message. I don't have address of server at home (where I am now),
> but send me an e-mail and I will reply with more information.
> 
> Pavel Sova
> Mol.Virol.Laboratory
> Columbia University
> New York
> ps44 at columbia.edu
> 
> 
> 
  	The adress is : blast at ncbi.nlm.nih.gov
	but i'm not sure if you can search only by amino acid composition.
	Rafael Najmanovich




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