PROTEIN PURIFICATION WOES - AN UPDATE!!!
afh30 at dka.sm.ic.ac.uk
Mon Nov 7 11:22:02 EST 1994
Firstly, thanks to all those who e-mailed me and posted messages. There
were several suggestions which I am following up, namely:
1) Reducing pH to <4 to ppt DNA (or using PEI, protamine sulfate, etc...)
2) Trying Exclusion on Q-media first then running through S-media
3) Dilution of detergent to levels below CMC
4) Alternative buffer systems
5) Checking pI of the protein
(sorry if I excluded any others, but I took them all into consideration!)
OK, I tried diluting out the detergent to below CMC and running on
S-Sepharose, but still got flat line after the void on the chart. I also
tried reducing the pH to below 4 but this didn't seem to work either. I
couldn't try the precipitations because we didnt have any PEI or protamine
sulfate at the time!
However, I did manage to get a good separation of proteins by running my
cell extract on a Q-column (I used a Bio-Rad Econo-Q-Column). So I now
have separated my protein away from a lot of other acidic proteins. I am
still analysing the fractions but I guess the next step would be to put
the excluded fractions on the S-Sepharose. Not bad for a Friday
I have just looked at the predicted net charge of the protein at pH 7 and
it is +7 - is this enough for good separation? It goes up to +28 at pH 4
but I would like to avoid acid treatment on the protein.
Anyway, thanks again for your ideas!
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