periplasmic coli proteins

[Henrik Nielsen]

JAB5 at VAX.YORK.AC.UK wrote:
: Dear Colleagues,
: Can anyone tell me how to best compile a list of periplasmic
: coli proteins? Both anchored and free are needed.
: Many thanks

One possibility is to use SWISS-PROT and search for lines beginning with

CC   -!- SUBCELLULAR LOCATION: 

Not every entry has such a line, but it may be enough to compile a list.

--

Henrik Nielsen

Center for Biological Sequence Analysis (CBS)
Department of Physical Chemistry (FKI)
The Technical University of Denmark (DTU) Building 206
DK-2800 Lyngby, Denmark

phone: +45 4288 2222 ext. 2470 (operator)
phone: +45 4593 1222 ext. 2470 (tone)
  fax: +45 4593 4808
e-mail: hnielsen at cbs.dth.dk