program for per-residue static accessibility

Rob Miller rmiller at
Thu Mar 30 08:44:59 EST 1995

David Mosenkis (tripos!rigel!david at wrote:
: > is there a program that will take a PDB crystal structure file as
: > input and produce a list of the solvent-accessibility of each residue
: > (e.g., measured in Angstroms^2 or as a percentage of the accessible area
: > of the bare unfolded amino acid, or whatever)?  thanks for any help.

: Arlin,
:   The upcoming 6.2 release of Sybyl from Tripos includes a new module called
:   ProTable for the analysis of protein structures.  In addition to numerous
:   other quantities, ProTable displays the relative solvent accessibility of


  You can also check out naccess on the BSM home page, probably for a 
few less of your local currency units.  Use your Web browser to look at


Rob Miller, Ph.D.  

Biomolecular Structure and Modelling Unit (BSM),
Department of Biochemistry and Molecular Biology,
University College / Gower Street / London WC1E 6BT.
United Kingdom.

Tel: 44 171387 7050 x2303 
Fax: 44 171380 7193
home: 44 171262 2081 x300
Internet: rmiller at

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