similarities/identities from an alignment?
simon.andrews at bbsrc.ac.uk
Wed Apr 12 06:40:50 EST 2000
Petri Kursula wrote:
> I would like to get a table of identities/similarities between each
> sequence in a multiple sequence alignment. Any pointers to servers or
> programs automatically doing this would be appreciated.
You can do this using the program GeneDoc, which is freeware. This
produces shaded graphics from multiple sequence alignments, and will
also tabulate percentage identity / similarity.
You can download it from;
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