Describing secondary structure

Toby Skinner tobyski at frogpad.freeserve.co.uk
Sat Feb 5 19:55:13 EST 2000


Hi, I'm trying to define a grammar for describing the secondary structure of
a protein, so far I've trawled the net and all the various prediction sites
but I cant find any that require the user to specify the seconday structure.
I need a simple language which can encompass all the essential information
about a proteins secondary structure.

If you have any ideas on this or would like to contribute then please reply
to this, I'll be sure to check back soon.

Toby






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