Problems with EMBOSS and Staden package...

R. Fisher rwfisher at mindspring.com
Tue Mar 9 04:08:51 EST 2004


I'm running into errors trying to access the EMBOSS package from spin.
 I've run the utility to create the links under the Emboss menu in
spin, but several commands fail due to unknown qualifier errors. 
PEPNET runs OK, for example, but if I try to run emma on the same
sequence(s), I get an error stating "Error produced by emboss:  died: 
unknown qualifier -inseqs".  I've checked my installation of EMBOSS,
and the programs run fine on their own.  I suspect that the scripts to
create the Staden-EMBOSS link may be out of date...all the returned
errors seem to contain invalid parameters....

Any suggestions?

Thanks,
R. Fisher




More information about the Staden mailing list