[Staden] prefinish for automated primer suggestion
deKesi
squig at web.de
Thu Sep 28 15:20:43 EST 2006
Hello,
I would like to use prefinish in an automated way to suggest primers for
assembly finishing.
Due to a lack of documentation I'm not sure if this is possible at all.
Can I use prefinish from the console to suggest primers for an gap4 -
assembly?
Where can I find a more detailed documentation about this tool and his
features?
If prefinish isen't able to perform these task I would consider to use
autofinish. But I'm not sure how to convert the gap4 database into .ace
format for use by autofinish. Any hints on these?
With kind regards,
deKesi
More information about the Staden
mailing list