Parameters for none-natural RNA

Christoph Steinbeck stein at microvirus.chem.tufts.edu
Fri Jun 7 11:59:29 EST 1996


A beginners question:

is there any advice, how to get xplor parameterized for the calculation
of a none-natural RNA, let's say sulfone linked instead of phosphate?
How do I get the force-field parameters for the SO2-Group and the
dihedral angles of the new parts of the building blocks.
I didn't find an answer in the faq, when I went through it (quickly :-))

Any help appreciated very much.

Regards, 
Chris

--
Dr. Christoph Steinbeck (stein at microvirus.chem.tufts.edu)
Dep. of Chemistry, Tufts University, 
62 Talbot Ave.
Medford, Massachusetts 02155
Phone: (617) 627-3881      FAX: (617) 627-3443



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