Refinement problem - topology file

Qilu Ye qy1 at post.queensu.ca
Fri Aug 21 11:53:27 EST 1998


Hi,everybody:
 
  I have a problem to refine my data with my rewriting topology file. 
Although I used xplo2d program to rewrite it it still did not work. The
pdb file always get woring number as follow:  

ATOM 2441 OP1' INH 301 9999.0009999.0009999.000 1.00 15.00
ATOM 2442 OP2' INH 301 9999.0009999.0009999.000 1.00 15.00
ATOM 2443 OP3' INH 301 9999.0009999.0009999.000 1.00 15.00 

  The molecular structure of my file is as follow:
                  O'2
                  |
              O'3-P'-O'1
                  |
             F1'- C1'-F'2
                  |
              C6  C4
             / \ / \
           7C  5C   C3
            |   |   |
           8C 10C   C2
             \ / \ /
              C9  C11
                  |
               F2-C1-F1
                  |
               O3-P-O1
                  |
                  O2       

  Can anyone give me a help? I would certainly appreciate it.


Qilu Ye



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