Map calculations with CNS

Martin Moche martin at alfa.mbb.ki.se
Thu Apr 8 13:58:27 EST 1999


Hi everybody
When I try to use CNS for map calculations (grid=0.33) after SA-refinement
the program terminates with:




XPROX:  8757 atoms have been selected for proximity calculation. 
 XMAPAL: allocating space for real space object. 
 XRAY>
 XRAY> do (map11=gave(real(map) * real(map), real(prop)) )
 DO> ( real(prop) > 0 and real(mask) <= 0 )
 ALLHP: request for 39820800 bytes
 %ALLHP error encountered: not enough core
   (CNS is in mode: SET ABORT=NORMal END)
***************************************************** 
ABORT mode will terminate program execution. 
*****************************************************
 Program will stop immediately. 
          ============================================================
           Maximum dynamic memory allocation:  46890688 bytes
           Maximum dynamic memory overhead:  804 bytes
           Program started at: 20:26:02 on 8-Apr-99
           Program stopped at: 20:28:39 on 8-Apr-99
           CPU time used:     136.6517 second  



Do I need more memory for this map calculation, or what ????

Regards 

Martin



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Martin Moche
Department of Medical Biochemistry and Biophysics
Doktorsringen 9A1
Karolinska Institutet 
171 77 Stockholm, Sweden
Tel. 0046-(0)8-728 76 98
Fax. 0046-(0)8-32 76 26
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