xplor not reading CaCb shifts
Barbara A. Lyons
blyons at zoo.uvm.edu
Tue Apr 2 10:02:22 EST 2002
Dear Group -
Has anyone had the problem of xplor ignoring the CaCb chemical shifts
file when running anneal.inp, even though the chem. shift file is
included thus?
in anneal.inp:
{=============== alpha/beta carbon chemical shift data ================}
{* Class 1 *}
{* carbon, alpha and beta, chemical shift restraints file *}
{===>} nmr.carb.file.1="grb7sh2_cacb_shifts.tbl";
{* carbon, alpha and beta, chemical shift restraint potential *}
{+ choice: "harmonic" "square" +}
{===>} nmr.carb.pot.1="harmonic";
{* carbon, alpha and beta, chemical shift restraint force value *}
{===>} nmr.carb.force.1=0.5;
Anneal.out gives no errors and appears to be accessing readcarb, etc. -
but it is pretty obvious that the CaCb chemical shift data is not being
used. Am I missing a flag somewhere? Also, how does one handle
unassigned Ca's and/or Cb's in the CaCb_shift file - just leave them blank?
Thanks in advance,
bal
--
Barbara A. Lyons
University of Vermont
Burlington, VT 05405
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