Accessible Surface Areas...

C.S.RAMAN raman at BIOC01.UTHSCSA.EDU
Fri Aug 27 19:34:37 EST 1993


Dear netters:

Is anyone aware of an algorithm that can compute polar and non-polar
solvent accessible surface areas for a PARTIAL MOLECULAR SURFACE, i.e.
a region of approximately 1000 square angstroms around a particular
residue in a protein?

I am not familiar with a program that does it and do know that both
ACCESS and the MSP suite do not implement this.

Before I write my own code to do the same, I was wondering if someone
had already done this?

I would appreciate a quick response on this matter.

Cheers
-raman

-- 
C.S.Raman                                 raman at bioc01.uthscsa.edu - Internet
UNIX Programming & Administration         70412.2354 at compuserve.com - CIS
SPARC & SGI Systems                       raman at hermes.chpc.utexas.edu - CHPC
Department of Biochemistry                c.raman at launchpad.unc.edu
UTHSCSA       
7703 Floyd Curl Dr.                       (210) 567-6623   [Tel]
San Antonio, TX 78284-7760                (210) 567-6595   [Fax]
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