Extracting Coorodinates from Stereo Diagrams.
C.S.RAMAN
raman at BIOC01.UTHSCSA.EDU
Tue Aug 16 08:41:55 EST 1994
To Menachem and others interested in this:
> There are still structures being published with the authors not
> depositing their coordinates. I happen to be interested in
> such a structure, and all I have is an alpha-carbon diagram
> in stereo. I remember that Michael Rossmann wrote a program
> many years ago to extract coordinates from a stereo diagram.
> Does anyone know where I can get this program or a related one?
In addition to what I had told you about its existence in the PDB, here
is what I recently found. The program is still called STEREO and has
been substantially modified (original version 1974 Michael Rossmann) by
Jin-Bi Dai also at purdue. The latest version of the program is dated
1994 and you can obtain a copy of the source and associated man page
from the latter author.
Jin-Bi Dai can be reached via e-mail at:
b4x at mace.cc.purdue.edu
Hope this helps.
Cheers
-raman
--
C.S.Raman
UNIX Programming & Administration
SPARC & SGI Systems raman at bioc01.uthscsa.edu - INTERNET
Department of Biochemistry raman at mintaka.chpc.utexas.edu - CHPC
UTHSCSA c.raman at launchpad.unc.edu
7703 Floyd Curl Dr. (210) 567-6623 [Tel]
San Antonio, TX 78284-7760 (210) 567-6595 [Fax]
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