Searching for proteins with structures on final stages of refinement

VICTOR B. STRELETS STRELETS at SCRI.FSU.EDU
Tue Apr 25 09:45:55 EST 1995


Hi Netters,

I'm finishing development of the new algorithm for the prediction
of protein secondary structure. Method does not use information
from multiple alignments and/or data structure probing experiments.
It will be installed soon (in 1-2 weeks) as an e-mail server for open
access, for a limited time until improved structure organization model
will be finally refined to achieve maximal efficacy of this approach.

Accuracy of the method appeared to be unexpectedly high and I would
like to find possibilities to use references from experimentalists about
structures which are in final stages of refinement to choose corresponding
sequences as an prediction illustration in my publication. I don't need
any info about structures itself and my interests are limited to aminoacid
sequences (or references to PIR or SwissProt) only. Is there anybody who
is ready to give such a reference(s)? And probably to discuss later
results in comparison with real structure elements placement?

I saw (twice) announcements about competition in the prediction of
secondary structures for just refined (but still not bublished)
structures. In principle this is same effort turned en mass. Could
someone give me reference how to reach its organizers?

Hope to hear from somebody,

V. Strelets




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