CONECT records in pdb files?
Simon M. Brocklehurst
smb at bioch.ox.ac.uk
Tue Apr 2 06:58:18 EST 1996
Dr Sue Brown wrote:
> I have a PDB file of a protein structure, and I need to generate a
> complete set of CONECT records from the coordinates, including the
> backbone connectivities.
> Are there any program utilities available to do this?
> If not, any other suggestions?
> Any help appreciated,
> Dr Sue Brown
> email: sebrown at laue.biochem.ubc.ca
> Dept of Biochemistry, University of British Columbia
> Vancouver, Canada, V6T 1Z3
You can do this easily with NAOMI by using input commands:
read pdb my_pdb_file.pdb
More info at the Web site:
| ,_ o Simon M. Brocklehurst,
| / //\, Oxford Centre for Molecular Sciences, Department of Biochemistry,
| \>> | University of Oxford, Oxford, UK.
| \\, E-mail: smb at bioch.ox.ac.uk | WWW: http://www.ocms.ox.ac.uk/~smb/
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