molscript and side chains

Carl 3lcid at qucdn.queensu.ca
Wed Aug 28 16:00:00 EST 1996


Does anyone know how to get side chains to connect with a ribbon 
trace when using molscript? I believe the documentation says that the 
ribbon does not go through the C alpha position since it is smoothed. 
The way it is now I have a residue floating in space and although I can
fix it slightly by rotating the molecule I would prefer the original 
orientation.  Does anyone know it there is a fix for this or a way to
"trick" the program into joining the side chain to the ribbon. Thanks 
for any advice.
	
		Carl DeLuca




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