Cross-reference structures to sequences

R Valluzzi rv at marvin.tufts.edu
Sun Oct 17 12:15:12 EST 1999


Try SCOP - the Structural Classification of Proteins Database:
http://scop.mrc-lmb.cam.ac.uk/scop/

There aren't as many structures as in the pdb, but it may be a useful
starting point.
RV

Steffen Graether wrote:

> Hi,
>
> Does anyone know if you can cross-reference structure entries with
> sequences? I know about the new pdb search with short sequences, but I
> want to cross-references specific folds (such as those described in
> Entrez/Structure) with short sequences. I've been searching through
> Entrez all morning but no luck :(.
>
> Many thanks,
> Steffen
>
> --
> *************************************************************************
> *Steffen Graether                   steffen at crystal.biochem.queensu.ca  *
> *Dept. of Biochemistry                                                  *
> *Queen's University, Kingston, Ontario, Canada                          *
> *                                                                       *
> * ###################### NOTE NEW NUMBERS ############################# *
> *                                                                       *
> *Voice (613) 533-6392                                                   *
> *Fax   (613) 533-2497                                                   *
> *************************************************************************





More information about the Xtal-log mailing list