New Saccharomyces Sequences 12/22/94

Mike Cherry cherry at GENOME.STANFORD.EDU
Thu Dec 22 07:44:57 EST 1994


SCCIIMJB    U02073    12800bp    DNA      PLN      21-DEC-1994
    Saccharomyces cerevisiae alphaS288C ribosomal protein (SUP46 and
      URP1) genes, complete cds.
    .

SCE3612     U18814     8443bp    ds-DNA   PLN      21-DEC-1994
    Saccharomyces cerevisiae chromosome V lambda clone 3612 and cosmid
      9747.
          putative aldehyde dehydrogenase; putative spliced ribosomal
      protein; putative protein-tyrosine-phosphatase.

SCE6592     U18813    40565bp    ds-DNA   PLN      21-DEC-1994
    Saccharomyces cerevisiae chromosome V lambda clones 6592, 4678,
      4742, and 3612.
          MOT2 (negative regulator); PET117 (cytochrome c oxidase assembly
      factor); ARG5,6 (N-acetyl-gamma-glutamyl-phosphate reductase and
      acetylglutamate kinase); CEM1 (beta-keto-acyl synthase); FCY2
      (purine-cytosine permease); HIS1 (ATP phosphoribosyltransferase);
      ICL1 (isocitrate lyase); tRNA-Ser.

SCE8199     U18779 L10830    36872bp    ds-DNA   PLN      19-DEC-1994
    Saccharomyces cerevisiae chromosome V cosmid 8199, 8334, and 9871.
          TIF51A (translation initiation factor eIF-5A); AFG1 (ATPase family
      gene); MCM3 (involved in initiation of replication at ARS
      elements); GDA1 (guanosine-diphosphatase of Golgi membrane); ANP1
      (aminonitrophenyl propanediol resistance protein); CYC7 (cytochrome
      c, isoform-2); GLY1 (protein required for glycine prototrophy);
      MAK10 (glucose-repressible protein); RAD23 (ubiquitin-like protein
      involved in UV excision repair); tRNA-Ser; tRNA-Gly.

SCE8229     U18917 L10718    67883bp    ds-DNA   PLN      21-DEC-1994
    Saccharomyces cerevisiae chromosome V cosmids 8229, 9115, 9132,
      9981, and lambda clones 7990 and 6134.
          SPT15 (TATA-box binding protein tfIId); OXA1 (involved in
      cytochrome oxidase biogenesis); RAD4 (nucleotide excision repair
      protein); BEM2 (bud-emergence protein); PET122 (translational
      activator of cytochrome c oxidase subunit III); MAG1
      (3-methyladenine DNA glycosylase); SPT2 (non-specific DNA binding
      protein); UBP3 (ubiquitin-specific protease); UBP5
      (ubiquitin-specific protease); tRNA-Val; tRNA-Arg; tRNA-Glu;
      tRNA-Ile.

SCE9163     U18922 L10718 L11229    64044bp    ds-DNA   PLN      21-DEC-1994
    Saccharomyces cerevisiae chromosome V cosmids 9163 and 9132.
          PAB1 (polyadenylate-binding protein); BMH1 (putative inhibitor of
      protein kinase C); PDA1 (alpha subunit of pyruvate dehydrogenase);
      BCK2 (serine/threonine protein kinase); ADK2 (adenylate kinase 2);
      DMC1 (DNA repair protein); RAD3 (DNA repair helicase); ISC10
      (meiosis-specific protein); CCA1 (tRNA nucleotidyltransferase);
      tRNA-Ile; X and Y' subtelomeric regions from the right arm.

SCE9379     U18796    43100bp    ds-DNA   PLN      21-DEC-1994
    Saccharomyces cerevisiae chromosome V cosmids 9379, 9581, and
      lambda clone 4678.
          GLN3 (positive nitrogen regulatory protein); MEI4 (meiosis-specific
      gene); HOM3 (aspartate kinase); CAJ1 (dnaJ homolog); tRNA-Gln.

SCE9537     U18778    66030bp    ds-DNA   PLN      19-DEC-1994
    Saccharomyces cerevisiae chromosome V cosmids 9537, 9581, 9495,
      9867, and lambda clone 5898.
          CEN5 (centromere); SRP1 (serine-rich protein); GPA2 (nucleotide
      binding regulatory protein); GCD11 (subunit gamma of translational
      initiation factor eIF2); MNN1 (alpha-1,3-mannosyltransferase); PAC2
      (synthetic lethal with cin8); PRE1 (22.6 kDa subunit of proteinase
      yscE); PRO3 (delta 1-pyrroline-5-carboxylate reductase); PRP22
      (pre-mRNA splicing factor RNA helicase); FAA2 (Long-chain fatty
      acid CoA ligase); SRB4 (RNA polymerase II suppressor); PSL1
      (Profilin synthetic lethal protein); YPT8 (Rab-family GTPase
      activating protein); GAL83 (glucose repression protein); CHO1
      (phosphatidylserine synthetase); AFG3 (member of Cdc48/Sec18
      family); PMI40 (mannose-6-phosphate isomerase); tRNA-Glu; tRNA-His;
      snRNA R14.

SCE9669     U18795    50849bp    ds-DNA   PLN      21-DEC-1994
    Saccharomyces cerevisiae chromosome V cosmids 9669, 8334, 8199, and
      lambda clone 1160.
          NPR2 (nitrogen permease regulator); PGM1 (phosphoglycerate mutase);
      RPL15B (60S ribosomal protein L15B); PRB1 (vacuolar protease B);
      CAN1 (arginine permease); CIN8 (kinesin-like protein); chromosome V
      left subtelomeric region.

SCE9747     U18839    64797bp    ds-DNA   PLN      21-DEC-1994
    Saccharomyces cerevisiae chromosome V cosmids 9747, 8198, 9781, and
      lambda clones 3612 and 6052.
          ILV1 (threonine dehydratase); TRP2 (anthranilate synthase component
      I); SSA4 (70 kDa heat shock protein); RAD51 (RecA-like protein);
      UBC6 (ubiquitin-conjugating enzyme); PRS1 (ribose-phosphate
      pyrophosphokinase); MET6 (5-methyltetrahydropteroyl
      triglutamate--homocysteine methyltransferase); tRNA-Glu; tRNA-Ala.

SCE9781     U18916 L11119 L11120    68303bp    ds-DNA   PLN      21-DEC-1994
    Saccharomyces cerevisiae chromosome V cosmids 9781, 8198, 9115,
      9981, and lambda clones 3955 and 6052.
          RSP5 (suppressor of mutations in SPT3); PAK1 (DNA polymerase alpha
      suppressing protein kinase); GDI1 (secretory pathway GDP
      dissociation inhibitor); GLC7 (protein phosphatase type 1); SPR6
      (protein involved in sporulation); BEB1 (protein involved in bud
      formation); SWI4 (transcription factor); GLO3 (protein involved in
      transition from stationary to proliferative phase); SCR1 (small
      cytoplasmic RNA); SNR4 (snRNA U4); tRNA-Val; tRNA-Lys; tRNA-His.

SCGCD10GN   X83511     2681bp    DNA      PLN      19-DEC-1994
    S.cerevisiae GCD10 gene.
    GCD10 gene.

SCU17918    U17918     3755bp    DNA      PLN      21-DEC-1994
    Saccharomyces cerevisiae essential gene from chromosome IX,
      complete cds.
    .

SCU18113    U18113     2044bp    DNA      PLN      21-DEC-1994
    Saccharomyces cerevisiae Ssf1p (SSF1) gene, complete cds.
    .

SCU18114    U18114     2328bp    DNA      PLN      21-DEC-1994
    Saccharomyces cerevisiae Ssf2p (SSF2) gene, complete cds.
    .

SCYNA1GN    X83512     2328bp    DNA      PLN      19-DEC-1994
    S.cerevisiae YNA1 gene.
    Yna1p.

YSCBUD8A    L37016     2763bp    ds-DNA   PLN      20-DEC-1994
    Saccharomyces cerevisiae BUD8 gene, complete cds.
    BUD8 gene.




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