New S. pombe sequences 6-Dec-95
Peter Rice
pmr at sanger.ac.uk
Thu Dec 7 12:01:16 EST 1995
This is a list of all new Schizosaccharomyces pombe entries in the
EMBL database since 1 Nov 95.
*** This completes the report for EMBL release 45 ***
ID SP37354 standard; RNA; FUN; 1680 BP.
AC U37354;
DT 04-NOV-1995 (Rel. 45, Created)
DT 04-NOV-1995 (Rel. 45, Last updated, Version 1)
DE Schizosaccharomyces pombe initiation factor eIF-2 gamma subunit
DE mRNA, complete cds.
KW .
ID SPAC12G12 standard; DNA; FUN; 32095 BP.
AC Z66568;
DT 04-NOV-1995 (Rel. 45, Created)
DT 04-NOV-1995 (Rel. 45, Last updated, Version 1)
DE S.pombe chromosome I cosmid c12G12.
KW beta-transducin; HSP60 chaperonin;
KW mitochondrial 60S ribosomal protein L6.
ID SPAC8A4 standard; DNA; FUN; 38141 BP.
AC Z66569;
DT 04-NOV-1995 (Rel. 45, Created)
DT 04-NOV-1995 (Rel. 45, Last updated, Version 1)
DE S.pombe chromosome I cosmid c8A4.
KW Drosophila PEANUT homologue; Drosophila PUFF homologue; permease;
KW RNA helicase; sulphite reductase;
KW ubiquitin carboxy-terminal hydrolase.
ID SP37421 standard; RNA; FUN; 1491 BP.
AC U37421;
DT 05-NOV-1995 (Rel. 45, Created)
DT 05-NOV-1995 (Rel. 45, Last updated, Version 1)
DE Schizosaccharomyces pombe radiation checkpoint (CHK1) mRNA,
DE complete cds.
KW .
ID SP20867 standard; RNA; FUN; 277 BP.
AC U20867;
DT 07-NOV-1995 (Rel. 45, Created)
DT 07-NOV-1995 (Rel. 45, Last updated, Version 1)
DE Schizosaccharomyces pombe RNA polymerase small Zn-binding subunit
DE (rpc10) mRNA, complete cds.
KW .
ID SPAC24B11 standard; DNA; FUN; 33914 BP.
AC Z67757;
DT 11-NOV-1995 (Rel. 45, Created)
DT 11-NOV-1995 (Rel. 45, Last updated, Version 1)
DE S.pombe chromosome I cosmid c24B11.
KW cation transport; chitin synthase 1; chs1; E1-E2 ATPase;
KW MAP kinase; porphobilinogen deaminase; protein kinase; spc1; sty1.
ID SPAC30D11 standard; DNA; FUN; 29653 BP.
AC Z67961;
DT 15-NOV-1995 (Rel. 45, Created)
DT 15-NOV-1995 (Rel. 45, Last updated, Version 1)
DE S.pombe chromosome I cosmid c30D11.
KW ARS element; clathrin coat assembly protein; DEAD-box; DNA repair;
KW glucoamylase; hus5; LTR; rad22; ribosomal protein L38;
KW RNA helicase; TF1; ubiquitin-conjugating enzyme; zinc finger.
ID SPRHO1A standard; RNA; FUN; 1254 BP.
AC D38180;
DT 14-NOV-1995 (Rel. 45, Created)
DT 14-NOV-1995 (Rel. 45, Last updated, Version 1)
DE Fission yeast mRNA for Rho protein.
KW .
ID SPRHO1B standard; RNA; FUN; 1294 BP.
AC D38181;
DT 14-NOV-1995 (Rel. 45, Created)
DT 14-NOV-1995 (Rel. 45, Last updated, Version 1)
DE Fission yeast mRNA for Rho protein.
KW .
ID SP33008 standard; DNA; FUN; 37596 BP.
AC U33008;
DT 16-NOV-1995 (Rel. 45, Created)
DT 16-NOV-1995 (Rel. 45, Last updated, Version 1)
DE Schizosaccharomyces pombe cosmid 1198.
KW .
ID SP33009 standard; DNA; FUN; 39305 BP.
AC U33009;
DT 16-NOV-1995 (Rel. 45, Created)
DT 16-NOV-1995 (Rel. 45, Last updated, Version 1)
DE Schizosaccharomyces pombe cosmid 1683.
KW .
ID SP33010 standard; DNA; FUN; 85837 BP.
AC U33010;
DT 16-NOV-1995 (Rel. 45, Created)
DT 16-NOV-1995 (Rel. 45, Last updated, Version 1)
DE Schizosaccharomyces pombe cosmids 359, 1198 and 1683.
KW .
ID SPMOP1MCS standard; RNA; FUN; 1260 BP.
AC L47353;
DT 18-NOV-1995 (Rel. 45, Created)
DT 18-NOV-1995 (Rel. 45, Last updated, Version 1)
DE Schizosaccharomyces pombe MOP1-MCS2 mRNA, complete cds.
KW .
ID SPAC21E11 standard; DNA; FUN; 12854 BP.
AC Z67999;
DT 20-NOV-1995 (Rel. 45, Created)
DT 20-NOV-1995 (Rel. 45, Last updated, Version 1)
DE S.pombe chromosome I cosmid c21E11.
KW auxin induced protein homologue; BZIP protein; cyclophilin; LCB2;
KW ribosomal protein; rpk5; serine palmitoyltransferase;
KW transcription activator; translation initiation factor.
ID SPAC1F7 standard; DNA; FUN; 34397 BP.
AC Z67998;
DT 20-NOV-1995 (Rel. 45, Created)
DT 20-NOV-1995 (Rel. 45, Last updated, Version 1)
DE S.pombe chromosome I cosmid c1F7.
KW 60S ribosomal protein K5; allantoicase; ATP-dependent RNA helicase;
KW auxin-induced protein homologue; cdc22; DAL2 homologue;
KW DCG1 homologue; iron transport multicopper oxidase; RHO1 homologue;
KW ribonucleoside-diphosphate reductase; rpk5; transcription factor;
KW transcription initiation protein; transmembrane protein.
ID SP26013 standard; RNA; FUN; 74 BP.
AC U26013;
DT 24-NOV-1995 (Rel. 45, Created)
DT 24-NOV-1995 (Rel. 45, Last updated, Version 1)
DE Schizosaccharomyces pombe small nuclear RNA snR38.
KW .
ID SP26014 standard; RNA; FUN; 76 BP.
AC U26014;
DT 24-NOV-1995 (Rel. 45, Created)
DT 24-NOV-1995 (Rel. 45, Last updated, Version 1)
DE Schizosaccharomyces pombe small nuclear RNA snR39.
KW .
ID SPNDK1 standard; DNA; FUN; 1550 BP.
AC D63678;
DT 23-NOV-1995 (Rel. 45, Created)
DT 23-NOV-1995 (Rel. 45, Last updated, Version 1)
DE Fission yeast ndk1 gene for nucleoside diphosphate kinase.
KW nucleoside diphosphate kinase.
ID SP39079 standard; DNA; FUN; 2678 BP.
AC U39079;
DT 25-NOV-1995 (Rel. 45, Created)
DT 25-NOV-1995 (Rel. 45, Last updated, Version 1)
DE Schizosaccharomyces pombe ARS binding protein 1 (abp1) gene,
DE complete cds.
KW .
ID SP40085 standard; DNA; FUN; 597 BP.
AC U40085;
DT 25-NOV-1995 (Rel. 45, Created)
DT 25-NOV-1995 (Rel. 45, Last updated, Version 1)
DE Schizosaccharomyces pombe 26S rRNA gene, partial sequence.
KW .
ID SPL972 standard; DNA; FUN; 6283 BP.
AC D78352;
DT 25-NOV-1995 (Rel. 45, Created)
DT 25-NOV-1995 (Rel. 45, Last updated, Version 1)
DE Yeast gene.
KW .
ID SPDIS1 standard; DNA; FUN; 4157 BP.
AC D55635;
DT 27-NOV-1995 (Rel. 45, Created)
DT 27-NOV-1995 (Rel. 45, Last updated, Version 1)
DE Yeast dis1+ gene for p93dis1, complete cds.
KW CDC2 kinase; microtuble; p93dis1; spindle pole body.
ID SP39144 standard; DNA; FUN; 2981 BP.
AC U39144;
DT 30-NOV-1995 (Rel. 45, Created)
DT 30-NOV-1995 (Rel. 45, Last updated, Version 1)
DE Schizosaccharomyces pombe Rec14 (REC14) gene, complete cds.
KW .
ID SPAC1F5 standard; DNA; FUN; 40242 BP.
AC Z68136;
DT 30-NOV-1995 (Rel. 45, Created)
DT 30-NOV-1995 (Rel. 45, Last updated, Version 1)
DE S. pombe chromosome I cosmid c1F5.
KW eukaryotic initiation factor 4A; heat shock protein 70; HSP70;
KW potassium transport protein; protein disulfide-isomerase;
KW serine/threonine protein kinase.
ID SPSWI2 standard; DNA; FUN; 3142 BP.
AC X93590;
DT 01-DEC-1995 (Rel. 45, Created)
DT 01-DEC-1995 (Rel. 45, Last updated, Version 1)
DE S.pombe swi2 gene
KW swi2 gene.
ID S78982 backbone; DNA; FUN; 2264 BP.
AC S78982;
DT 04-NOV-1995 (Rel. 45, Created)
DT 04-NOV-1995 (Rel. 45, Last updated, Version 1)
DE pac1+=double-strand-specific Pac1 ribonuclease [Schizosaccharomyces
DE pombe=fission yeast, temperature-sensitive mutant snm1-1, Genomic,
DE 2264 nt].
KW .
ID SPAC3H1 standard; DNA; FUN; 36920 BP.
AC Z68144;
DT 04-DEC-1995 (Rel. 45, Created)
DT 04-DEC-1995 (Rel. 45, Last updated, Version 1)
DE S. pombe chromosome I cosmid c3H1.
KW arginase; aru1; membrane protein; serine/threonine protein kinase;
KW transcriptional regulator; zinc finger protein.
To obtain any of the sequences in EMBL format you can use the EBI
NETSERV e-mail server, netserv at ebi.ac.uk - send the word help
and instructions will be returned.
World Wide Web URLs are:
http://www.sanger.ac.uk/pombe/pombe.html (Sanger Centre S.pombe page)
http://www.sanger.ac.uk/searching.html (Sanger Centre SRS search)
http://www.ebi.ac.uk/queries/queries.html (EBI sequence retrieval)
http://www2.ncbi.nlm.nih.gov/genbank/query_form.html
(NCBI sequence retrieval)
To obtain any of the sequences in GenBank format you can use the NCBI
retrieve e-mail server, retrieve at ncbi.nlm.nih.gov - send the word help
and instructions will be returned. You must use the accession number
as the ID (locus) name may be different in GenBank.
--
------------------------------------------------------------------------
Peter Rice | Informatics Division
E-mail: pmr at sanger.ac.uk | The Sanger Centre
Tel: (44) 1223 494967 | Hinxton Hall, Hinxton,
Fax: (44) 1223 494919 | Cambs, CB10 1RQ
URL: http://www.sanger.ac.uk/~pmr/ | England
More information about the Yeast
mailing list