H-rich proteins in yeast

"MIPS16::MEWES" at EHPMIC.MIPS.BIOCHEM.MPG.DE "MIPS16::MEWES" at EHPMIC.MIPS.BIOCHEM.MPG.DE
Mon Jan 16 06:28:30 EST 1995


It is very easy to scan for any pattern by using the SCAN command for
the ATLAS program (I think the statistics of a Nucleic Acid Database does
not help very much). Here is what you have to do:

ATLAS> SCAN HHHH
  328 entries on the current list
ATLAS> find/current cerevisiae
bud-emergence protein Bem2p - yeast (Saccharomyces cerevisiae)
  PIR2:A55156  bud-emergence protein Bem2p - yeast (Saccharomyces cerevisiae)
casein kinase I homolog YCK2 - yeast (Saccharomyces cerevisiae)
  PIR2:S29522  casein kinase I homolog YCK2 - yeast (Saccharomyces cerevisiae)
GTPase-activating protein IPL2 - yeast (Saccharomyces cerevisiae)
  PIR2:A55155  GTPase-activating protein IPL2 - yeast (Saccharomyces
               cerevisiae)
hypothetical membrane protein YBR086c - yeast (Saccharomyces cerevisiae)
  PIR2:S44670  hypothetical membrane protein YBR086c - yeast (Saccharomyces
               cerevisiae)
hypothetical protein (GLC7 5' region) - yeast (Saccharomyces cerevisiae)
  PIR2:S30855  hypothetical protein (GLC7 5' region) - yeast (Saccharomyces
               cerevisiae)
hypothetical protein YBR1004 - yeast (Saccharomyces cerevisiae)
  PIR3:S46572  hypothetical protein YBR1004 - yeast (Saccharomyces cerevisiae)
hypothetical protein YBR129c - yeast (Saccharomyces cerevisiae)
  PIR2:S45998  hypothetical protein YBR129c - yeast (Saccharomyces cerevisiae)
hypothetical protein YBR225w - yeast (Saccharomyces cerevisiae)
  PIR2:S46101  hypothetical protein YBR225w - yeast (Saccharomyces cerevisiae)
hypothetical protein YHR097c - yeast (Saccharomyces cerevisiae)
  PIR2:S46727  hypothetical protein YHR097c - yeast (Saccharomyces cerevisiae)
hypothetical protein YKL175w - yeast (Saccharomyces cerevisiae)
  PIR2:S38005  hypothetical protein YKL175w - yeast (Saccharomyces cerevisiae)
hypothetical protein YKL640 - yeast (Saccharomyces cerevisiae)
  PIR3:S44585  hypothetical protein YKL640 - yeast (Saccharomyces cerevisiae)
hypothetical protein YKR075c - yeast (Saccharomyces cerevisiae)
  PIR2:S38152  hypothetical protein YKR075c - yeast (Saccharomyces cerevisiae)
protein kinase (EC 2.7.1.37), glucose repression-regulating - yeast
            (Saccharomyces cerevisiae)
  PIR2:A26030  protein kinase (EC 2.7.1.37), glucose repression-regulating -
               yeast (Saccharomyces cerevisiae)
SSV7 protein homolog - yeast (Saccharomyces cerevisiae)
  PIR2:S38177  SSV7 protein homolog - yeast (Saccharomyces cerevisiae)
suppressor protein FPS1 - yeast (Saccharomyces cerevisiae)
  PIR2:S16712  suppressor protein FPS1 - yeast (Saccharomyces cerevisiae)
S.cerevisiae DNA for ORF's from chromosome XV
  PATCHX:X83121_J    S.cerevisiae DNA for ORF's from chromosome XV
  16 titles found

The ATLAS program is available through PIR/Washington (for the Americas)
and through MIPS/Martinsried (for Europe). The PATCHX entry found is an
automatic translation from a sequence not yet in the PIR-International
Protein Sequence Databank. A WWW version of ATLAS is in preparation. ATLAS
clients are available on request.

H. Werner Mewes
MPI f. Biochemie
MIPS
82152 Martinsried
Germany



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