New Saccharomyces Sequences 04/25/96

SGD Sequences yeast-seq at GENOME.STANFORD.EDU
Fri Apr 26 22:10:42 EST 1996


SCACR1      X84736     2205bp    DNA      PLN      19-APR-1996
    S.cerevisiae RTA1 gene.
    ACR1 gene; ACR1-protein; RTA1.

SCCHRXVI    Z71255   165536bp    DNA      PLN      19-APR-1996
    S.cerevisiae chromosome XVI 165536 bp sequence, cen rightwards.
    ARO7; ATPase; beta-transducin; CCL1; CDC21 homologue; CDE1; CDE2; CDE3;
     centromere; CHL1; chorismate mutase; citrate synthase; coatomer zeta
     subunit; cyclin; delta element; DnaJ; DSS4; electron transport
     flavoprotein; eukaryotic iniation factor 5; F1Fo-ATP synthase g subunit;
     gamma adaptin; GLN1; glutamine synthetase; Grave's disease;
     guanine-releasing protein; HAL1; halotolerance; histidine tRNA
     synthetase; HTS1; isocitrate lyase; LPT1; LTR; MAK3; MFS1; Mitochondrial
     carrier protein; N-acetyltransferase; NADPH-cytochrome P450 reductase;
     negative regulator; NHP6A; nonhistone chromosomal protein 6A; OSD1;
     phenylalanyl-tRNA synthetase; phosphotyrosine protein phosphatase;
     polyposis; protamine P1; protein kinase; protein transport; regulatory
     protein; ribosomal protein L37a; RNA polymerase I; ROX1; RPA2; SEC8;
     SMK1; spermidine synthase; TIF5; TKL1; transfer RNA-Gly; transfer
     RNA-Lys; transfer RNA-Phe; transfer RNA-Ser; transketolase; tropomyosin;
     ubiquitin-activating enzyme; vacuolar H(+)-ATPase 54 kda subunit; VMA13;
     YMC1; YME1; YTA11; zinc finger protein; YPL012W; YPL011C; YPL010W;
     YPL009C; Chl1p; YPL007C; YPL006W; YPL005W; YPL004C; YPL003W; YPL002C;
     YPL001W; CIT3; Cit3p; YPR002W; YPR003C; YPR004C; Hal1p; YPR006C;
     YPR007C; YPR008W; YPR009W; Rpa2p; YPR011C; YPR012C; YPR013C; YPR014C;
     YPR015C; Dss4p; YPR017W; CDC54; Cdc54p; YPR019W; YPR020C; YPR021C;
     YPR022C; Yme1p; Ccl1p; YPR025W; YPR026C; YPR027W; YPR028C; YPR029W;
     YPR030W; YPR031W; Hts1p; YPR033W; Gln1p; Vma13p; YPR036C; YPR037W;
     Tif5p; YPR039C; YPR040W; YPR041C; YPR042W; MSF1; Msf1p; YPR044W;
     YPR045C; Mak3p; Nhp6ap; Smk1p; Sec8p; YPR050W; YPR051W; Ymc1p; Aro7p;
     YPR054C; YPR055W; YPR056C; YPR057W; Rox1p; YPR059W; YPR060W; YPR061C;
     YPR062C; YPR063W; YPR064W; YPR065W; LTP1; Ltp1p; Tkl1p.

SCCIVL37K   Z71781    36687bp    DNA      PLN      24-APR-1996
    S.cerevisiae chromosome IV left arm (EU) DNA segment (36687 bp).
    act2 gene; actin; FAD synthetase; FAD1 gene; MPS1 gene; NAM1 gene; NAT 1
     gene; protein kinase; protein phosphatase; SIR2 gene; SIT4 gene; SIT4;
     protein phosphatase catalytic subunit homologue;  SIT4; ; FAD1; NAM1;
     RNA11; SIR2; NAT1; N-terminal acetyltransferase; ACT2; actin-like
     protein ACT2; MPS1.

SCSCY1GEN   X97305     2836bp    DNA      PLN      19-APR-1996
    S.cerevisiae SCY1 gene.
    SCY1 gene; SCY1.

SCTEF       X92971     4655bp    DNA      PLN      23-APR-1996
    S.cerevisiae translocation elongation factor gene.
    EF2-like protein; translation elongation factor EF4; translocation
     elongation factor.

SCU26015    U26015       97bp    uRNA     PLN      25-APR-1996
    Saccharomyces cerevisiae small nuclear RNA snR40.
    snR40.

SCU31900    U31900    38779bp    DNA      PLN      25-APR-1996
    Saccharomyces cerevisiae chromosome XVI cosmid 9723/71015.
    CIT3; Cit3p; LPZ2w; Lpz2p; tRNA-Phe; LPZ3c; Lpz3p; LPZ4c; Lpz4p; HAL1;
     Hal1p; LPZ6c; Lpz6p; LPZ7c; Lpz7p; tRNA-Gly; LPZ8w; Lpz8p; LPZ9w; Lpz9p;
     RPA135; Rpa135p; tRNA-Lys; LPZ11c; Lpz11p; LPZ12c; Lpz12p; LPZ13c;
     Lpz13p; LPZ14c; Lpz14p; LPZ15c; Lpz15p; DSS4; Dss4p.

SCU36624    U36624    27120bp    DNA      PLN      25-APR-1996
    Saccharomyces cerevisiae chromosome XVI, left arm cosmid 9901.
    LPB1w; Lpb1p; SUV3; Suv3p; ERG10; Erg10p; LPB4w; Lpb4p; SHA3; Sha3p;
     LPB6c; Lpb6p; LPB7w; Lpb7p; LPB8c; Lpb8p; RAD1; Rad1p; LPB10w; Lpb10p;
     LPB11c; Lpb11p; LPB12c; Lpb12p; LPB13w; Lpb13p; LPB14c; Lpb14p.

SCU43680    U43680     1606bp    DNA      PLN      25-APR-1996
    Saccharomyces cerevisiae upstream activation factor subunit Rrn5p (RRN5)
     gene, complete cds.
    RRN5; Rrn5p.

SCU43681    U43681     1561bp    DNA      PLN      25-APR-1996
    Saccharomyces cerevisiae upstream activation factor subunit Rrn9p (RRN9)
     gene, complete cds.
    RRN9; Rrn9p.

SCU43682    U43682      776bp    DNA      PLN      25-APR-1996
    Saccharomyces cerevisiae upstream activation factor subunit Rrn10p
     (RRN10) gene, complete cds.
    RRN10; Rrn10p.

SCU52369    U52369      819bp    mRNA     PLN      25-APR-1996
    Saccharomyces cerevisiae non-classical export Nce3p (NCE3) mRNA, complete
     cds.
    NCE3; non-classical export Nce3p.

SCVCOSMGN   X89633    37672bp    DNA      PLN      21-APR-1996
    S.cerevisiae DNA for VPH1, MOD5, CAP20, ORF1 and SNF2 genes.
    cap associated protein; CAP20 gene; dihydrofolate reductase; disulfite
     isomerase; heat shock protein; hypothetical protein; isopentenyl
     transferase; mitochondrial import protein; mod5 gene; ORF1; permease;
     phosphoglycerate mutase; regulatory protein gam1; sigma element; SNF2
     gene; transporter; tRNA-Ala; Vacuolar ATP synthase; vph1 gene;
     hypothetical permease; VPH1; vacuolar ATP synthase VPH1; hypothetical
     transporter; MOD5; isopentenyltransferase MOD5; CAP20; CAP associated
     protein; mitochondrial import protein ORF1; hypothetical dihydrofolate
     reductase; hypothetical phosphoglycerate mutase; hypothetical heat shock
     protein; hypothetical protein disulfite isomerase; transfer RNA-Ala;
     SNF2.

SCYIP1GEN   X97342     2134bp    DNA      PLN      23-APR-1996
    S.cerevisiae YIP1 gene.
    YIP1 gene; YIP1.

SCYIP3GEN   X97400     1200bp    DNA      PLN      24-APR-1996
    S.cerevisiae YIP3 gene.
    YIP3 gene; YIP3.

SCYIP3PRT   X97401      759bp    RNA      PLN      24-APR-1996
    S.cerevisiae mRNA for YIP3 protein.
    YIP3 gene; YIP3.

Please note that new sequences take about a week to appear in SGD.  To
obtain any of the yeast GenBank sequences use the NCBI retrieve e-mail
server, retrieve at ncbi.nlm.nih.gov - send the word help and
instructions will be returned.
  World Wide Web links for sequences:
     Only Yeast:  http://genome-www.stanford.edu/cgi-bin/genbank_search
  BLAST & FASTA:  http://genome-www.stanford.edu/Arabidopsis/
 NCBI (GenBank):  http://www.ncbi.nlm.nih.gov/Web/Search/
     EBI (EMBL):  http://www.ebi.ac.uk/ebi_docs/embl_db/ebi/topembl.html
           DDBJ:  http://www.nig.ac.jp/



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