New Schizosaccharomyces entries 15-Feb-95

Peter Rice pmr at sanger.ac.uk
Thu Feb 15 08:54:39 EST 1996


This is a list of all new Schizosaccharomyces pombe entries in the
EMBL database since 5-Dec-95.

The list includes 11 new cosmids from chromosome I.
 
ID   SPAC11D3   standard; DNA; FUN; 39292 BP.
AC   Z68166;
DT   06-DEC-1995 (Rel. 46, Created)
DT   06-DEC-1995 (Rel. 46, Last updated, Version 1)
DE   S.pombe chromosome I cosmid c11D3.
KW   agmatinase; conidiation-specific protein; drug resistance protein;
KW   permease; transcriptional regulatory protein; zinc finger protein.

ID   SPAC15F9   standard; DNA; FUN; 3918 BP.
AC   Z68197;
DT   12-DEC-1995 (Rel. 46, Created)
DT   12-DEC-1995 (Rel. 46, Last updated, Version 1)
DE   S.pombe chromosome I cosmid c15F9.
KW   protein transport protein; SEC13 homologue.

ID   SPAC18G6   standard; DNA; FUN; 37620 BP.
AC   Z68198;
DT   12-DEC-1995 (Rel. 46, Created)
DT   12-DEC-1995 (Rel. 46, Last updated, Version 1)
DE   S.pombe chromosome I cosmid c18G6.
KW   40S ribosomal protein; GCN1 homologue; heterchromatin protein;
KW   serine hydroxymethyltransferase; transfer RNA-Val;
KW   translational activator; YPT1-related protein 3; ypt3.

ID   SP22371    standard; RNA; FUN; 2944 BP.
AC   U22371;
DT   17-DEC-1995 (Rel. 46, Created)
DT   17-DEC-1995 (Rel. 46, Last updated, Version 1)
DE   Schizosaccharomyces pombe Pak1p (PAK1) mRNA, complete cds.
KW   .

ID   SP38522    standard; DNA; FUN; 3043 BP.
AC   U38522;
DT   23-DEC-1995 (Rel. 46, Created)
DT   23-DEC-1995 (Rel. 46, Last updated, Version 1)
DE   Schizosaccharomyces pombe ORC1-related protein (orp1) gene,
DE   complete cds.
KW   .

ID   SPPAC2P    standard; RNA; FUN; 2674 BP.
AC   D43748;
DT   26-DEC-1995 (Rel. 46, Created)
DT   26-DEC-1995 (Rel. 46, Last updated, Version 1)
DE   Fission yeast mRNA for pac2p.
KW   Pac2p.

ID   SPSCK1     standard; DNA; FUN; 2914 BP.
AC   D38108;
DT   26-DEC-1995 (Rel. 46, Created)
DT   26-DEC-1995 (Rel. 46, Last updated, Version 1)
DE   Fission yeast sck1 gene for protein kinase.
KW   protein kinase.

ID   SP34953    standard; RNA; FUN; 598 BP.
AC   U34953;
DT   29-DEC-1995 (Rel. 46, Created)
DT   29-DEC-1995 (Rel. 46, Last updated, Version 1)
DE   Schizosaccharomyces pombe heat shock protein Hsp9p (HSP9) mRNA,
DE   complete cds.
KW   .

ID   SPEF1AA1   standard; RNA; FUN; 1442 BP.
AC   D82571;
DT   29-DEC-1995 (Rel. 46, Created)
DT   29-DEC-1995 (Rel. 46, Last updated, Version 1)
DE   Fission yeast mRNA for elongation factor 1 alpha-A.
KW   elongation factor 1 alpha-A.

ID   SPEF1AB2   standard; RNA; FUN; 1466 BP.
AC   D82572;
DT   29-DEC-1995 (Rel. 46, Created)
DT   29-DEC-1995 (Rel. 46, Last updated, Version 1)
DE   Fission yeast mRNA for elongation factor 1 alpha-B.
KW   elongation factor 1 alpha-B.

ID   SPEF1AB3   standard; RNA; FUN; 1424 BP.
AC   D82573;
DT   29-DEC-1995 (Rel. 46, Created)
DT   29-DEC-1995 (Rel. 46, Last updated, Version 1)
DE   Fission yeast mRNA for elongation factor 1 alpha-C.
KW   elongation factor 1 alpha-B.

ID   SPEF1B4    standard; RNA; FUN; 823 BP.
AC   D82574;
DT   29-DEC-1995 (Rel. 46, Created)
DT   29-DEC-1995 (Rel. 46, Last updated, Version 1)
DE   Fission yeast mRNA for elingation factor 1 beta.
KW   elongation factor 1 beta.

ID   SPEF35     standard; RNA; FUN; 1042 BP.
AC   D82575;
DT   29-DEC-1995 (Rel. 46, Created)
DT   29-DEC-1995 (Rel. 46, Last updated, Version 1)
DE   Fission yeast mRNA for elongation factor 3.
KW   elongation factor 3.

ID   SP33214    standard; RNA; FUN; 815 BP.
AC   U33214;
DT   31-DEC-1995 (Rel. 46, Created)
DT   31-DEC-1995 (Rel. 46, Last updated, Version 1)
DE   Schizosaccharomyces pombe QM homolog (SPQM) mRNA, complete cds.
KW   .

ID   SP38783    standard; DNA; FUN; 5634 BP.
AC   U38783;
DT   02-JAN-1996 (Rel. 46, Created)
DT   02-JAN-1996 (Rel. 46, Last updated, Version 1)
DE   Schizosaccharomyces pombe brefeldin A resistance protein (hba1) and
DE   unknown orf genes, complete cds.
KW   .

ID   SPRAD18    standard; DNA; FUN; 5910 BP.
AC   X80929;
DT   06-JAN-1996 (Rel. 46, Created)
DT   06-JAN-1996 (Rel. 46, Last updated, Version 2)
DE   S.pombe rad18 and rpgL29 genes
KW   RAD18 gene; ribosomal protein L29; rpgL29 gene.

ID   SPRHC18    standard; DNA; FUN; 4530 BP.
AC   X80930;
DT   06-JAN-1996 (Rel. 46, Created)
DT   06-JAN-1996 (Rel. 46, Last updated, Version 2)
DE   S.pombe RHC18 genes
KW   RHC18 gene.

ID   SP42189    standard; RNA; FUN; 1431 BP.
AC   U42189;
DT   06-JAN-1996 (Rel. 46, Created)
DT   06-JAN-1996 (Rel. 46, Last updated, Version 1)
DE   Schizosaccharomyces pombe elongation factor 1-alpha mRNA, complete
DE   cds.
KW   .

ID   SPURA1     standard; RNA; FUN; 6892 BP.
AC   X81841;
DT   11-JAN-1996 (Rel. 46, Created)
DT   11-JAN-1996 (Rel. 46, Last updated, Version 2)
DE   S.pombe mRNA for URA1
KW   carbamoyl-phosphate synthase (glutamine hydrolysing); URA1 gene.

ID   SPHXK1P    standard; RNA; FUN; 1900 BP.
AC   X92894;
DT   17-JAN-1996 (Rel. 46, Created)
DT   17-JAN-1996 (Rel. 46, Last updated, Version 2)
DE   S.pombe mRNA for hexokinase 1
KW   hexokinase 1; HXK1 gene.

ID   SPHXK2     standard; RNA; FUN; 1634 BP.
AC   X92895;
DT   17-JAN-1996 (Rel. 46, Created)
DT   17-JAN-1996 (Rel. 46, Last updated, Version 2)
DE   S.pombe mRNA for hexokinase 2
KW   hexokinase 2; HXK2 gene.

ID   SP40378    standard; RNA; FUN; 2349 BP.
AC   U40378;
DT   25-JAN-1996 (Rel. 46, Created)
DT   25-JAN-1996 (Rel. 46, Last updated, Version 1)
DE   Schizosaccharomyces pombe origin recognition protein 1 (orc1+)
DE   gene, complete cds.
KW   .

ID   SP43392    standard; DNA; FUN; 1989 BP.
AC   U43392;
DT   26-JAN-1996 (Rel. 46, Created)
DT   26-JAN-1996 (Rel. 46, Last updated, Version 1)
DE   Schizosaccharomyces pombe origin recognition protein Orc1+p (ORC1+)
DE   gene, partial cds.
KW   .

ID   SPAC23E2   standard; DNA; FUN; 14000 BP.
AC   Z68887;
DT   26-JAN-1996 (Rel. 46, Created)
DT   26-JAN-1996 (Rel. 46, Last updated, Version 1)
DE   S.pombe chromosome I cosmid c23E2.
KW   gaf2; transfer-RNA Val; zinc finger.

ID   SPWDRP     standard; RNA; FUN; 1913 BP.
AC   L75944;
DT   26-JAN-1996 (Rel. 46, Created)
DT   26-JAN-1996 (Rel. 46, Last updated, Version 1)
DE   Schizosaccharomyces pombe WD repeat protein mRNA, complete cds.
KW   WD repeat protein.

ID   SP18794    standard; RNA; FUN; 471 BP.
AC   U18794;
DT   29-JAN-1996 (Rel. 46, Created)
DT   29-JAN-1996 (Rel. 46, Last updated, Version 1)
DE   Schizosaccharomyces pombe ubiquinol-cytochrome c oxidoreductase
DE   subunit VIII (QCR8) mRNA, complete cds.
KW   .

ID   SP21002    standard; DNA; FUN; 2460 BP.
AC   U21002;
DT   31-JAN-1996 (Rel. 46, Created)
DT   31-JAN-1996 (Rel. 46, Last updated, Version 1)
DE   Schizosaccharomyces pombe malic acid transport protein (Mae1) gene,
DE   complete cds.
KW   .

ID   SPAC3H8    standard; DNA; FUN; 25329 BP.
AC   Z69086;
DT   31-JAN-1996 (Rel. 46, Created)
DT   31-JAN-1996 (Rel. 46, Last updated, Version 1)
DE   S.pombe chromosome I cosmid c3H8.
KW   pyruvate decarboxylase; regulatory protein; SEC14 homologue;
KW   zinc finger.

ID   SP33625    standard; RNA; FUN; 1488 BP.
AC   U33625;
DT   03-FEB-1996 (Rel. 46, Created)
DT   03-FEB-1996 (Rel. 46, Last updated, Version 1)
DE   Schizosaccharomyces pombe APN1 apurinic/apyrimidic endonuclease
DE   (SPAPN1) mRNA, complete cds.
KW   .

ID   SPAC1D4    standard; DNA; FUN; 31201 BP.
AC   Z69239;
DT   02-FEB-1996 (Rel. 46, Created)
DT   02-FEB-1996 (Rel. 46, Last updated, Version 1)
DE   S.pombe chromosome I cosmid c1D4.
KW   byr1; cct2; CDP-alcohol phosphatidyltransferase; chaperonin; csk1;
KW   cyclin suppressing protein kinase; DNA repair helicase;
KW   protein kinase; rad15; rhp3; serine/threonine protein kinase;
KW   TCP1 beta subunit homologue; tf2 LTR.

ID   SPAC26A3   standard; DNA; FUN; 38149 BP.
AC   Z69240;
DT   02-FEB-1996 (Rel. 46, Created)
DT   02-FEB-1996 (Rel. 46, Last updated, Version 1)
DE   S.pombe chromosome I cosmid 26A3.
KW   A?G-specific adenine glycosylase; ABR proteins;
KW   aspartic proteinase; clathrin heavy chain; dhp1; methyltransferase;
KW   nuclear pore protein; retrotransposon; ribosomal protein L16;
KW   snRNP protein B; sxa1; tf2; zinc finger.

ID   SPAC27F1   standard; DNA; FUN; 23830 BP.
AC   Z69368;
DT   06-FEB-1996 (Rel. 46, Created)
DT   06-FEB-1996 (Rel. 46, Last updated, Version 1)
DE   S.pombe chromosome I cosmid c27F1.
KW   cdc8; coiled-coil; FKBP-type peptidyl-prolyl cis-trans isomerase;
KW   ornithine aminotransferase; SMF2 homologue; tropomyosin;
KW   ubiquitin carboxyl-terminal hydrolase.

ID   SPAC3F10   standard; DNA; FUN; 38010 BP.
AC   Z69369;
DT   06-FEB-1996 (Rel. 46, Created)
DT   06-FEB-1996 (Rel. 46, Last updated, Version 1)
DE   S.pombe chromosome I cosmid c3F10.
KW   ABC transporter; cell division control protein;
KW   glutathione synthetase; glycyl tRNA synthetase; gsa1;
KW   GTP-binding protein; initiator trna phosphoribosyl-transferase;
KW   map3; nda4; pheromone M-factor receptor;
KW   phosphoribosylformimino-5-aminoimidazole carboxamide ribotide iso*;
KW   potassium transport; tf2 element; transcription factor;
KW   transfer RNA-Thr.

ID   SPAC4H3    standard; DNA; FUN; 34635 BP.
AC   Z69380;
DT   08-FEB-1996 (Rel. 46, Created)
DT   08-FEB-1996 (Rel. 46, Last updated, Version 1)
DE   S.pombe chromosome I cosmid c4H3.
KW   5S rRNA; acyl carrier protein; coiled-coil; DNA helicase;
KW   endonuclease hypersensitive site; Glucose 1-dehydrogenase;
KW   pyruvate kinase.

ID   SPAC13F4   standard; DNA; FUN; 35357 BP.
AC   Z69379;
DT   08-FEB-1996 (Rel. 46, Created)
DT   08-FEB-1996 (Rel. 46, Last updated, Version 1)
DE   S.pombe chromosome I cosmid c13F4.
KW   60S ribosomal protein L18; cob intron protein; coiled-coil;
KW   DEAD box; Diptheria toxin resistance protein; helicase;
KW   splicing factor; transfer-RNA Pro; transfer-RNA Ser.

To obtain any of the sequences in EMBL format you can use the EBI
NETSERV e-mail server, netserv at ebi.ac.uk - send the word help
and instructions will be returned.

World Wide Web URLs are:

        http://www.sanger.ac.uk/~yeastpub/svw/home.html
        http://www.sanger.ac.uk/searching.html
        http://www.ebi.ac.uk/queries/queries.html

To obtain any of the sequences in GenBank format you can use the NCBI
retrieve e-mail server, retrieve at ncbi.nlm.nih.gov - send the word help
and instructions will be returned. You must use the accession number
as the ID (locus) name may be different in GenBank.
--
------------------------------------------------------------------------
Peter Rice                           | Informatics Division
E-mail: pmr at sanger.ac.uk             | The Sanger Centre
Tel: (44) 1223 494967                | Hinxton Hall, Hinxton,
Fax: (44) 1223 494919                | Cambs, CB10 1RQ
URL: http://www.sanger.ac.uk/~pmr/   | England



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