Yeast codon preference table
bdunn at GENOME.STANFORD.EDU
Thu Jan 11 15:37:34 EST 1996
On Thu, 11 Jan 1996, Tomas Drgon wrote:
> Hi folks.
> Can somebody give me a pointer to yeast nuclear codon preference table?
You can get codon usage tables for many organisms from
the following ftp/Web address: ftp://weeds.mgh.harvard.edu/pub/codon/
(For yeast you want the file: ysc.cod and for E. coli you want: eco.cod)
You can get to the same codon usage tables by using the SGD gopher address:
gopher://genome-gopher.stanford.edu/ and then select "FTP Archives for
Molecular Biology" and then select "Codon Usage Tables"
In addition, you can access the following Web URL's for even more recent
codon usage statistics from the CUTG database (from Yasukazu Nakamura):
Barbara Dunn, Ph.D., Database Curator
Saccharomyces Genome Database
Department of Genetics Internet contacts for SGD:
Stanford University Med. Ctr. WWW: http://genome-www.stanford.edu/
Stanford, CA 94305-5120 USA Gopher: genome-gopher.stanford.edu
phone: 415-725-8956 ftp: genome-ftp.stanford.edu
e-mail: bdunn at genome.stanford.edu
More information about the Yeast