New Saccharomyces Sequences 11/02/96

SGD Sequences yeast-seq at GENOME.STANFORD.EDU
Sat Nov 2 07:05:53 EST 1996


=========== New Sequences =============

SCOST5GEN   X97545      652bp    DNA      PLN      31-OCT-1996
    S.cerevisiae OST5 gene.
    9.5 kD subunit; N-oligosaccharyltransferase; OST5 gene; OST5; 9.5 kD
     subunit of N-oligosaccharyltransferase.

SCU33754    U33754     7676bp    DNA      PLN      02-NOV-1996
    Saccharomyces cerevisiae Vam7p (VAM7), ras-like GTPase (YPT11) and
     MIG1-like zinc finger protein (MLZ1) genes, complete cds and Sip2p
     (SPM2) gene, partial cds.
    VAM7; Vam7p; YPT11; ras-like GTPase; MLZ1; MIG1-like zinc finger protein;
     SIP2; Sip2p.

SCU62252    U62252     1288bp    DNA      PLN      01-NOV-1996
    Saccharomyces cerevisiae mitochondrial inheritance component Mdm12p
     (MDM12) gene, nuclear gene encoding mitochondrial protein, complete cds.
    MDM12; mitochondrial inheritance component Mdm12p.

=========== Updated Features/Annotations  =============

SCCHXIV43   Z46843    43481bp    DNA      PLN      30-OCT-1996
    S.cerevisiae chromosome XIV DNA (43.5 kb).
    Fk506-bindingadenosine deaminase; cyclase-associated protein;
     cytoskeleton-associated protein (putative); orf2; orf3; MFA2; mating
     pheromone a-factor 2; orf5; orf6; NH3 permease; adenosine deaminase
     (putative); orf9; CAP/SRV2; NAM9; mitochondrial ribosomal protein
     (putative); orf12; FKB1/FPR1/RBP1; FK506-binding protein proline
     rotamase; orf14; orf15; tRNA-Phe; orf16; MOM22; mitochondrial outer
     membrane component; CPT1; sn-1,2-diacylglycerol
     cholinephosphotransferase; orf19; tyrosine phosphatase (putative);
     orf21; orf22; orf23.

SCISCAI     X95974     1524bp    DNA      PLN      01-NOV-1996
    S.capensis mitochondrial I-ScaI gene.
    homing endonuclease; I-ScaI gene; cytb; I-ScaI; homing nuclease.

SCORFSDNA   X89016    17933bp    DNA      PLN      30-OCT-1996
    S.cerevisiae genes RHO2, TOP2, MKT1, END2, PMS1 AND ORFs N2250, N2254,
     N2312.
    END2 gene; MKT1 gene; PMS1 gene; RHO2 gene; top2 gene; ORF N2237; ORF
     N2244; ORF N2250; ORF N2254; ORF N2302; ORF N2307; ORF N2312; ORF N2317.

SCU08352    U08352     3647bp    DNA      PLN      31-OCT-1996
    Saccharomyces cerevisiae putative carrier protein (SHM1) gene, complete
     cds.
    SHM1; putative carrier protein.

SCU66864    U66864     2186bp    DNA      PLN      01-NOV-1996
    Saccharomyces cerevisiae GPI1 gene, complete cds.
    GPI1; Gpi1p.

SCXII       X92670    14607bp    DNA      PLN      01-NOV-1996
    S.cerevisiae 14.6kb fragment from chromosome VII.
    ribosomal protein; G2812; G2816; G2827; G2830; G2834.

SCYGR109C   Z72894     8657bp    DNA      PLN      01-NOV-1996
    S.cerevisiae chromosome VII reading frame ORF YGR109c.
    CLB6; TY3B; TY3A.

SCYGR110W   Z72895     9326bp    DNA      PLN      01-NOV-1996
    S.cerevisiae chromosome VII reading frame ORF YGR110w.
    TY3A; TY3B.

SCYGR111W   Z72896     2311bp    DNA      PLN      01-NOV-1996
    S.cerevisiae chromosome VII reading frame ORF YGR111w.

SCYGR112W   Z72897     1862bp    DNA      PLN      01-NOV-1996
    S.cerevisiae chromosome VII reading frame ORF YGR112w.

SCYGR113W   Z72898     1736bp    DNA      PLN      01-NOV-1996
    S.cerevisiae chromosome VII reading frame ORF YGR113w.

SCYGR114C   Z72899     5147bp    DNA      PLN      01-NOV-1996
    S.cerevisiae chromosome VII reading frame ORF YGR114c.
    SPT6.

SCYGR117C   Z72902     6315bp    DNA      PLN      01-NOV-1996
    S.cerevisiae chromosome VII reading frame ORF YGR117c.

SCYGR118W   Z72903     1567bp    DNA      PLN      01-NOV-1996
    S.cerevisiae chromosome VII reading frame ORF YGR118w.
    RPS28A.

SCYGR119C   Z72904     2302bp    DNA      PLN      01-NOV-1996
    S.cerevisiae chromosome VII reading frame ORF YGR119c.
    NUP57.


Please note that new sequences take about a week to appear in SGD.  To
obtain any of the yeast GenBank sequences use the NCBI retrieve e-mail
server, retrieve at ncbi.nlm.nih.gov - send the word help and
instructions will be returned.
  World Wide Web links for sequences:
     Only Yeast:  http://genome-www.stanford.edu/cgi-bin/genbank_search
  BLAST & FASTA:  http://genome-www.stanford.edu/Saccharomyces/
 NCBI (GenBank):  http://www.ncbi.nlm.nih.gov/Web/Search/
     EBI (EMBL):  http://www.ebi.ac.uk/ebi_docs/embl_db/ebi/topembl.html
           DDBJ:  http://ftp2.ddbj.nig.ac.jp:8000/cgi-bin/getent/



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